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SCNpilot_cont_500_bf_scaffold_801_22

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: 21400..22077

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CEAFD7 related cluster n=1 Tax=unknown RepID=UPI0003CEAFD7 similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 224.0
  • Bit_score: 347
  • Evalue 1.20e-92
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 224.0
  • Bit_score: 347
  • Evalue 1.80e-92
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 224.0
  • Bit_score: 344
  • Evalue 3.30e-92
  • rbh

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Taxonomy

Mesorhizobium sp. LSHC422A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGCCTGCAGCCAAGATAACGGTGCCCACGGGCGCCGTCGAAATGCAACTCGTGCATCGTGCGCTGGCGCGCGACGGCGAGGCCTTTCGCGCCATCATGAAGGCAAACAACCAGCGGCTCTATCGATTGGCTCGCGGCGTGATGCGCAACGACGCCGAAGCCGAGGATGTAGTGCAGGAGGCCTATGTGCGGGCCTTCGAGCATCTCGATGCCTTTCGCGGCGAATCCTCCCTTGCCACCTGGCTGTCGCGCATCGTCATCAACGAGGCGCTTGGCAGGCTCCGCAAGAGACGAAGGACGGTGCCTGCGACAGCCGTGGATGCCCCGCAGGCGGACATCATCCCCTTCCCCCTCAATCCAGGCGACGATCCGGAGCGGACGATGGCGCAGAGGCAGATCCTGAAGCTGGTCGAGCAGGCGGCGGAGAGGCTTCCCAATGTCTATCGCGTGGTCTTCATCGCTCGTGTCGTCGAAGGGCTGAGCGTCGAGGAGACGGCCGAGTTGCTCGGCCTGCTGCCGGAGACGGTCAAGACCAGGCTGCACAGGGCGCGCGCCATGATGCGCAAGGCGCTGGACGAGCAGATCGGCCCGGTGCTGCTCGACGCCTTCCCCTTTGCCGGTCGGCGCTGCGAGCGGTTGACCAAGGCCGTGATGGACAGGCTCGGCCTGCCCGGCTGA
PROTEIN sequence
Length: 226
MPAAKITVPTGAVEMQLVHRALARDGEAFRAIMKANNQRLYRLARGVMRNDAEAEDVVQEAYVRAFEHLDAFRGESSLATWLSRIVINEALGRLRKRRRTVPATAVDAPQADIIPFPLNPGDDPERTMAQRQILKLVEQAAERLPNVYRVVFIARVVEGLSVEETAELLGLLPETVKTRLHRARAMMRKALDEQIGPVLLDAFPFAGRRCERLTKAVMDRLGLPG*