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SCNpilot_cont_500_bf_scaffold_801

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Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_801_1
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..164
DNA (162bp) protein (54aa)
UPI0003CF6B56 related cluster n=1 Tax=unknown RepID=UPI0003CF6B56
Salicylate hydroxylase {ECO:0000313|EMBL:ESY66419.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase
SCNpilot_cont_500_bf_scaffold_801_2
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(198..860)
DNA (663bp) protein (221aa)
Mlr8156 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q983V5_RHILO
hypothetical protein
Mlr8156 protein {ECO:0000313|EMBL:BAB53775.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_801_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1054..1635)
DNA (582bp) protein (194aa)
Acriflavin resistance protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRG3_9BACT
Acriflavin resistance protein {ECO:0000313|EMBL:EEF57568.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
acriflavin resistance protein; K07789 RND superfamily, multidrug transport protein MdtC
SCNpilot_cont_500_bf_scaffold_801_4
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1625..4189)
DNA (2565bp) protein (855aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00038068E0
Putative membrane protein {ECO:0000313|EMBL:BAO90345.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE67.;"
RND efflux transporter
SCNpilot_cont_500_bf_scaffold_801_5
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4193..5311)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00037EE5E8 rbh
RND family efflux transporter MFP subunit; K07799 putative multidrug efflux transporter MdtA
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACB94811.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_500_bf_scaffold_801_6
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5461..5907
DNA (447bp) protein (149aa)
ABC transporter, substrate-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q984L7_RHILO
ABC transporter substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:BAB53613.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_801_7
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5964..6440
DNA (477bp) protein (159aa)
ABC transporter, substrate-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q984L7_RHILO
ABC transporter substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:ETA72277.1}; Flags: Precursor;; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
SCNpilot_cont_500_bf_scaffold_801_8
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6705..7676
DNA (972bp) protein (324aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q984L6_RHILO
Uncharacterized protein {ECO:0000313|EMBL:CDX19479.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_801_9
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7637..8020
DNA (384bp) protein (128aa)
ABC transporter permease n=1 Tax=Rhizobium loti RepID=UPI000361A005
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:AID29192.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
ABC transporter permease; K02050 NitT/TauT family transport system permease protein
SCNpilot_cont_500_bf_scaffold_801_10
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8027..9412)
DNA (1386bp) protein (462aa)
integral membrane sensor signal transduction histidine kinase; K07649 two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFI7_XANP2
SCNpilot_cont_500_bf_scaffold_801_11
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9402..10076)
DNA (675bp) protein (225aa)
PREDICTED: probable transcriptional regulator ycf27-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C134C0 rbh
two-component response regulator; K07774 two-component system, OmpR family, response regulator TctD
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:ETA72281.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
SCNpilot_cont_500_bf_scaffold_801_12
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10252..11055)
DNA (804bp) protein (268aa)
ABC transporter related protein n=3 Tax=Mesorhizobium RepID=F7Y4T4_MESOW rbh
Putative amino acid transport protein, ATP-binding protein {ECO:0000313|EMBL:CDX39815.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
ABC-type polar amino acid transport system, ATPase component rbh
SCNpilot_cont_500_bf_scaffold_801_13
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11104..12261)
DNA (1158bp) protein (386aa)
UPI0003CE1EFA related cluster n=1 Tax=unknown RepID=UPI0003CE1EFA rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:ESY95568.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
amino acid ABC transporter permease; K09971 general L-amino acid transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_801_14
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12266..13453)
DNA (1188bp) protein (396aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KQR8_MESAW rbh
Amino-acid transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CDX27381.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family rbh
SCNpilot_cont_500_bf_scaffold_801_15
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13513..14541)
DNA (1029bp) protein (343aa)
Amino acid ABC transporter substrate-binding protein n=4 Tax=Mesorhizobium RepID=V7GBV3_9RHIZ rbh
Amino-acid transporter subunit periplasmic-binding component of ABC superfamily {ECO:0000313|EMBL:CDX44849.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
amnino acid ABC transporter substrate-binding protein; K09969 general L-amino acid transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_801_16
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14828..15691)
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y550_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHH13101.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_801_17
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15696..16331)
DNA (636bp) protein (212aa)
UPI0003CE4B79 related cluster n=1 Tax=unknown RepID=UPI0003CE4B79 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY66594.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_801_18
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16637..17806
DNA (1170bp) protein (390aa)
Cystathionine beta-lyase, PLP-dependent {ECO:0000313|EMBL:CCV06112.1}; EC=4.4.1.8 {ECO:0000313|EMBL:CCV06112.1};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
cystathionine beta-lyase (EC:4.4.1.8); K01760 cystathionine beta-lyase [EC:4.4.1.8] rbh
Cystathionine beta-lyase, PLP-dependent n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EP40_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_801_19
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18019..19107
DNA (1089bp) protein (363aa)
CBS domain containing membrane protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y553_9RHIZ rbh
CBS domain containing membrane protein {ECO:0000313|EMBL:EHH13104.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
HPP family protein; K07168 CBS domain-containing membrane protein rbh
SCNpilot_cont_500_bf_scaffold_801_20
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19170..19817
DNA (648bp) protein (216aa)
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HPL8_9BRAD
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:ERF86738.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
type 12 methyltransferase
SCNpilot_cont_500_bf_scaffold_801_21
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19765..21066)
DNA (1302bp) protein (434aa)
GGDEF domain protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JGY8_OLICO
Diguanylate cyclase {ECO:0000313|EMBL:EZQ16176.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
GGDEF domain-containing protein
SCNpilot_cont_500_bf_scaffold_801_22
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21400..22077
DNA (678bp) protein (226aa)
UPI0003CEAFD7 related cluster n=1 Tax=unknown RepID=UPI0003CEAFD7 rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;"
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
SCNpilot_cont_500_bf_scaffold_801_23
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22193..22717
DNA (525bp) protein (175aa)
UPI0003CDD328 related cluster n=1 Tax=unknown RepID=UPI0003CDD328
Membrane protein {ECO:0000313|EMBL:ESW82983.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein; K08995 putative membrane protein
SCNpilot_cont_500_bf_scaffold_801_24
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22726..23034
DNA (309bp) protein (103aa)
UPI0003CFFA50 related cluster n=1 Tax=unknown RepID=UPI0003CFFA50
Amicyanin {ECO:0000313|EMBL:ESZ20619.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
blue (type 1) copper domain-containing protein
SCNpilot_cont_500_bf_scaffold_801_trna_2
unknown

Not on your lists

comp(23128..23201)
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_801_25
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23244..23675)
DNA (432bp) protein (144aa)
ETC complex I subunit conserved region n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y4V3_MESOW
ETC complex I subunit conserved region
ETC complex I subunit conserved region {ECO:0000313|EMBL:AGB47050.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_500_bf_scaffold_801_trna_1
unknown

Not on your lists

23753..23826
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_801_26
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23981..25207
DNA (1227bp) protein (409aa)
Citrate transporter n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJL4_MESCW rbh
citrate transporter rbh
Citrate transporter {ECO:0000313|EMBL:ADV13776.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_801_27
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25232..26044)
DNA (813bp) protein (271aa)
enoyl-CoA hydratase n=1 Tax=Rhizobium meliloti RepID=UPI0003643243 rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJS42977.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. BRH_c41.;"
Enoyl-CoA hydratase/isomerase rbh
SCNpilot_cont_500_bf_scaffold_801_28
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26034..28112)
DNA (2079bp) protein (693aa)
CoA-binding protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MDK8_9BURK rbh
CoA-binding protein rbh
CoA-binding protein {ECO:0000313|EMBL:AET90776.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
Displaying items 1-30 of 40 in total

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