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SCNpilot_cont_500_bf_scaffold_2515_10

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: comp(7184..8593)

Top 3 Functional Annotations

Value Algorithm Source
PTS galactitol transporter subunit IIC n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E3186 similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 471.0
  • Bit_score: 826
  • Evalue 1.90e-236
  • rbh
PTS system galactitol-specific IIC component {ECO:0000313|EMBL:ELT48614.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 469.0
  • Bit_score: 811
  • Evalue 6.80e-232
PTS system galactitol-specific IIC component; K02775 PTS system, galactitol-specific IIC component similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 469.0
  • Bit_score: 805
  • Evalue 8.40e-231

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Taxonomy

Ochrobactrum intermedium → Ochrobactrum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
ATGGATACGTTTTTGACCGGCCTGAAATCGGCCGTGGACACGCTTGGGCCAACGGTGCTGTTGCCCATCGTGATCTTCATCATCGCGCTGGTGCTGGGGGCCAAGGCGGGCAGGGCTTTCCGCGCCGCGGTGACGATCGGCGTCGCCTTTATCGGTATCAACCTGGTTCTGGGCCTGATGCTCGGGTCCATCGGCGACGTTGCCAAGGCCATCGTCACCAACACGGGCATCCACCGCGACATCGTCGACGTGGGCTGGCCATCGGCGGCGGCGATCGCGTTCGGCTCGTCAGTCGGTCTGTGGGTCATTCCGATCGGCATTGCCGTCAATATCGCGTTGCTGCTCCTGCGCTGGACGCGCACGCTCAATGTCGACGTCTGGAACTTCTGGCATTTCGCCTTCGTTGGCTCGCTGGCGACGGCGGCAACCAATAGCCTCGCCTATGGCCTGGTGATCGCCGCCCTGGTCGCGGCGCTGGCGCTGCTCTTTGCCGACTGGTCGGCACGCGCGGTGCAGCAGTTCTACGGCATTCCCGGCGTGTCGGTGCCGCATCTGGCATCGGCGCAGATCCTGCCGATCGCCATCGTGCTGAACTGGATCATGGATCGCATTCCCGGCATCAACCGCATCAACATCAGCACCGAGACCATCGAGAAGCGTTTCGGCGTGTTCGGCGAGCCCGTGGTGCTCGGCCTGATCATCGGCCTGGTGCTCGGTCTCATCGCCTACTACAACGCCGGCGATTTCGGCGTCGTGCTGTCCAAGGTGCTGGGCACCGGCATGACGCTGGCGGCGGTGATGCTTCTGCTGCCGCGCATGGTCAAGGTGCTGATGGAAGGCCTGCTGCCGATCTCGGACGCCGCGCAGGAGTTCGTGCGCAAGCGGACCGGCGACCGTGAACTGCTGGTCGGCCTGGATTCCGCGATCCTGATCGGCCATCCGGCCGCGATCTCTTCGTCGCTGATCCTGGTCCCGATCGCCATCATCCTGTCGGTCATCCTGCCCGGCAACCGCGTCATCCTGTTCGCCGACCTCGCCGTCATCCCCTTCATCGTCGCGATGACCGCGCCGCTGCTGAAGGGCAACGTCTTCCGCATGGTGATCGTCGGCACGGTGACGCTGGCCGTCGGCTTCTACGTCGCCAACGCGCTCGCCCCGCTGTTCACCAGCACGGCGGTCTCATCAGGCTTCCAGTTGCCGGCCAACGCGGTGCAGATCACTTCGGTCGTGGACGGCTTCCTCTGGGTGCCCTACGTGATCATCGAACTGGTCAAGTCGCTGGCGGTCATCGGCCTGGTGATCCTGGCCCTGGTGATCGGCGCCGCCTTCTTCCTCTATCGCCGCAACACCGCCGCCTGGGAACGGGCGGCAGGCGCCGAGGACGAACCGGCCGAGGCGAACGCGGCATAG
PROTEIN sequence
Length: 470
MDTFLTGLKSAVDTLGPTVLLPIVIFIIALVLGAKAGRAFRAAVTIGVAFIGINLVLGLMLGSIGDVAKAIVTNTGIHRDIVDVGWPSAAAIAFGSSVGLWVIPIGIAVNIALLLLRWTRTLNVDVWNFWHFAFVGSLATAATNSLAYGLVIAALVAALALLFADWSARAVQQFYGIPGVSVPHLASAQILPIAIVLNWIMDRIPGINRINISTETIEKRFGVFGEPVVLGLIIGLVLGLIAYYNAGDFGVVLSKVLGTGMTLAAVMLLLPRMVKVLMEGLLPISDAAQEFVRKRTGDRELLVGLDSAILIGHPAAISSSLILVPIAIILSVILPGNRVILFADLAVIPFIVAMTAPLLKGNVFRMVIVGTVTLAVGFYVANALAPLFTSTAVSSGFQLPANAVQITSVVDGFLWVPYVIIELVKSLAVIGLVILALVIGAAFFLYRRNTAAWERAAGAEDEPAEANAA*