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SCNpilot_cont_500_bf_scaffold_2515

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2515_1
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..407
DNA (405bp) protein (135aa)
oligoendopeptidase F; K08602 oligoendopeptidase F [EC:3.4.24.-]
Oligoendopeptidase F n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98H72_RHILO
Oligoendopeptidase F {ECO:0000313|EMBL:BAB49994.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_2515_2
unknown

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comp(454..717)
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2515_3
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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785..1552
DNA (768bp) protein (256aa)
NADH dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI000365F75D rbh
NADH dehydogenase-like protein rbh
50S ribosomal protein L21 {ECO:0000313|EMBL:AID32324.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_500_bf_scaffold_2515_4
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1809..2834
DNA (1026bp) protein (342aa)
para-aminobenzoate synthase subunit I; K01665 para-aminobenzoate synthetase component I [EC:2.6.1.85] rbh
Para-aminobenzoate synthase, subunit I n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y951_MESOW rbh
Para-aminobenzoate synthase, subunit I {ECO:0000313|EMBL:AEH86423.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_2515_5
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2824..3486
DNA (663bp) protein (221aa)
hypothetical protein; K02619 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] rbh
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037F99DD rbh
Mlr3007 protein {ECO:0000313|EMBL:BAB49997.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_2515_6
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3534..4469
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EMF8_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV05512.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2515_7
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4620..6065
DNA (1446bp) protein (482aa)
Homospermidine synthase {ECO:0000313|EMBL:CCV05511.1}; EC=2.5.1.44 {ECO:0000313|EMBL:CCV05511.1};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
homospermidine synthase (EC:2.5.1.44); K00808 homospermidine synthase [EC:2.5.1.44] rbh
Homospermidine synthase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F115_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_2515_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6169..6456)
DNA (288bp) protein (96aa)
PTS galactitol transporter subunit IIB n=1 Tax=Hoeflea sp. 108 RepID=UPI000377C7EF
Putative enzyme IIB component of PTS KpLE2 phage-like element {ECO:0000313|EMBL:CDX16194.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
phosphotransferase system, galactitol-specific IIB component
SCNpilot_cont_500_bf_scaffold_2515_9
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6588..7070)
DNA (483bp) protein (161aa)
PTS sugar transporter subunit IIA n=1 Tax=Hoeflea sp. 108 RepID=UPI000361BF02
Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 {ECO:0000313|EMBL:EIM74274.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type)
SCNpilot_cont_500_bf_scaffold_2515_10
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7184..8593)
DNA (1410bp) protein (470aa)
PTS galactitol transporter subunit IIC n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E3186 rbh
PTS system galactitol-specific IIC component {ECO:0000313|EMBL:ELT48614.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
PTS system galactitol-specific IIC component; K02775 PTS system, galactitol-specific IIC component
SCNpilot_cont_500_bf_scaffold_2515_11
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8848..9237
DNA (390bp) protein (130aa)
Outer membrane lipoprotein omp10 homolog n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EMW5_9RHIZ
Outer membrane lipoprotein omp10 homolog {ECO:0000313|EMBL:CDX30810.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
outer membrane lipoprotein
SCNpilot_cont_500_bf_scaffold_2515_12
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9422..11566
DNA (2145bp) protein (715aa)
5'-nucleotidase {ECO:0000313|EMBL:CCV16077.1}; EC=3.1.3.5 {ECO:0000313|EMBL:CCV16077.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
5'-nucleotidase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FFJ3_9RHIZ rbh
5'-Nucleotidase domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_2515_13
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12609..12809
DNA (201bp) protein (67aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
ferrochelatase (EC:4.99.1.1); K01772 ferrochelatase [EC:4.99.1.1]
Ferrochelatase n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HSW8_9RHIZ
SCNpilot_cont_500_bf_scaffold_2515_14
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13025..13975
DNA (951bp) protein (317aa)
Band 7 protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y941_MESOW rbh
hypothetical protein rbh
Membrane protein {ECO:0000313|EMBL:ESY79031.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
SCNpilot_cont_500_bf_scaffold_2515_15
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13997..14461
DNA (465bp) protein (155aa)
UPI0003D0323E related cluster n=1 Tax=unknown RepID=UPI0003D0323E
Membrane protein {ECO:0000313|EMBL:ESZ29190.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein; K07340 hypothetical protein
SCNpilot_cont_500_bf_scaffold_2515_16
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14627..15628)
DNA (1002bp) protein (334aa)
D-arabinose 5-phosphate isomerase {ECO:0000313|EMBL:CCV16081.1}; EC=5.3.1.13 {ECO:0000313|EMBL:CCV16081.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
KpsF/GutQ family protein (EC:5.3.1.13) rbh
D-arabinose 5-phosphate isomerase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIA1_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_2515_17
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16018..17658
DNA (1641bp) protein (547aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIU4_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV16083.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2515_18
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17740..18645)
DNA (906bp) protein (302aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
UTP-glucose-1-phosphate uridylyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] rbh
Glucose-1-phosphate uridylyltransferase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EMY0_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_2515_19
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18853..20076
DNA (1224bp) protein (408aa)
UPI0003CE292B related cluster n=1 Tax=unknown RepID=UPI0003CE292B rbh
Lytic transglycosylase {ECO:0000313|EMBL:ESY67535.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
lytic murein transglycosylase rbh
SCNpilot_cont_500_bf_scaffold_2515_20
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20190..21404
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJ42_MESAW rbh
Uncharacterized protein {ECO:0000313|EMBL:AID32342.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2515_21
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21435..22328)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000376484B rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADH88532.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_2515_22
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22665..23654
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D631E rbh
alcohol dehydrogenase zinc-binding domain-containing protein rbh
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ADH88531.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_2515_23
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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23657..24448
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003663DEE rbh
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ44541.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hpaH2; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase
SCNpilot_cont_500_bf_scaffold_2515_24
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24527..25999
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000382B9DE rbh
Family 5 extracellular solute-binding protein {ECO:0000313|EMBL:EHK55455.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
family 5 extracellular solute-binding protein
Displaying 24 items

View Taxonomy