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SCNpilot_cont_500_bf_scaffold_3211_12

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: 12660..14066

Top 3 Functional Annotations

Value Algorithm Source
nodulation protein n=1 Tax=Rhizobium loti RepID=UPI0003653A02 similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 463.0
  • Bit_score: 769
  • Evalue 2.80e-219
Multidrug resistance protein MdtC {ECO:0000313|EMBL:AID32201.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 463.0
  • Bit_score: 767
  • Evalue 1.10e-218
acriflavin resistance protein; K07789 RND superfamily, multidrug transport protein MdtC similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 463.0
  • Bit_score: 692
  • Evalue 7.90e-197

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Taxonomy

Mesorhizobium huakuii → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1407
ATGAACCTCTCCACCCCGTTCATCCGCCGCCCGGTAGCCACGACGCTCCTAACGCTGGGCGTGCTGCTGGCCGGGCTGGTGGCGTTTCCGCTGCTGCCGGTGGCGCCGCTGCCGGCCGTCGACTACCCCGTCATCTCGGTGCAGGCGAGCCTGCCCGGCGCCAGCCCGCAGGTGGTGGCAGAGACGGTGGCGAGCCCGCTGGAGCGGCATCTCGGCCAGATCGCCGACGTCAACGAGATGACCTCGTCCTCCAGCGTCGGCTCGGCGCGCATCACGCTGCAGTTCGGCCTCGACCGCGACATAGACGGCGCCGCGCGCGACGTGCAGGCGGCGATCAACGCCGCCCGCGCCGACCTGCCGTCGAGCCTGCGCTCCAACCCGACCTATCGCAAGGTGAACCCGGCCGACGCTCCGATCCTCATCCTGGCGCTGACCTCGGACACGCTGTCCAAGGGCGAGATCTTCGACGCCGCCAGCACCGTGCTGGCGCAGAAGCTGTCACAGGTCGACGGCGTCGGCGAGGTGTCGGTCGGCGGCTCCTCGCTGCCGGCGGTGCGGGTCGAACTGGTGCCGCCGGCGCTCTACAAATACGGCATCGGCCTGGAGGACGTGCGCGCCGCGCTCGCCTCGGCCAACGCGCACAGCCCGAAGGGCGCGATCGACGTCGGCCAGCAACGCTACCAGATCCTGGCCAACGACCAGGCGACGGCGGCCAAGGACTACCGGTCGCTGATCGTCGCCTACCGCAACGGCGCCCCCGTGCGGCTGAGCGATGTCGGCGAGGTGACGGATTCGGTCGAGAACATCCGCAATGCCGGCCTCGCCAACGGCAAGCCGGCGGTGCTGGTGATCCTCAACCGCTCGCCCAACGCCAACATCATCGACACGGTCGACCGGGTGAAGGCGCTGCTGCCGACGCTGCGCGCCTCGGTCTCGCCGGCCATCGACATCAACCTCGCCAACGACCGCTCGACCACCATCCGCGCCTCGCTGCAGGAGGTCGAGCAGGCGCTGATGATCGCCATCGGCCTGGTGATCCTGGTCGTCTTCGCCTTCCTGCGCGACGCGCGCTCGACGCTGATCCCCGTGGTGGCGGTGCCGGTGTCGCTGGTCGGCACGCTTGGCATCATGTACCTGCTCGGCTTCTCGATCGACAACCTGTCGCTGATGGCGCTGACCATCGCCACCGGCTTCGTCGTCGACGACGCCATCGTCGTGCTCGAGAACATCTCCCGCCACATCTCCGACGGCATGCCGCCGACGCGGGCGGCGATCGAGGGCGCCCGGGAAGTCGGCTTCACGGTGCTGGCGATGAGCGTGTCGCTGATCGCCGTCTTCATCCCCATCCTGCTGATGGGCGGCCTGGTCGGTCGGCTGTTCCGCCGTCTTCCTGCGCCCTCACCGTGA
PROTEIN sequence
Length: 469
MNLSTPFIRRPVATTLLTLGVLLAGLVAFPLLPVAPLPAVDYPVISVQASLPGASPQVVAETVASPLERHLGQIADVNEMTSSSSVGSARITLQFGLDRDIDGAARDVQAAINAARADLPSSLRSNPTYRKVNPADAPILILALTSDTLSKGEIFDAASTVLAQKLSQVDGVGEVSVGGSSLPAVRVELVPPALYKYGIGLEDVRAALASANAHSPKGAIDVGQQRYQILANDQATAAKDYRSLIVAYRNGAPVRLSDVGEVTDSVENIRNAGLANGKPAVLVILNRSPNANIIDTVDRVKALLPTLRASVSPAIDINLANDRSTTIRASLQEVEQALMIAIGLVILVVFAFLRDARSTLIPVVAVPVSLVGTLGIMYLLGFSIDNLSLMALTIATGFVVDDAIVVLENISRHISDGMPPTRAAIEGAREVGFTVLAMSVSLIAVFIPILLMGGLVGRLFRRLPAPSP*