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SCNpilot_cont_500_bf_scaffold_3211

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3211_1
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..647
DNA (645bp) protein (215aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
Putative 3-methyladenine DNA glycosylase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KE71_MESAW rbh
DNA-3-methyladenine glycosylase rbh
SCNpilot_cont_500_bf_scaffold_3211_2
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(590..1108)
DNA (519bp) protein (173aa)
Sulfate transporter family protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EWU9_9RHIZ
Sulfate transporter family protein {ECO:0000313|EMBL:CCV04136.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
sulfate transporter; K03321 sulfate permease, SulP family
SCNpilot_cont_500_bf_scaffold_3211_3
unknown

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1531..1776
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3211_4
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2372..2641)
DNA (270bp) protein (90aa)
XRE family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FK21_9RHIZ
XRE family transcriptional regulator {ECO:0000313|EMBL:ESX80400.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
helix-turn-helix domain-containing protein
SCNpilot_cont_500_bf_scaffold_3211_5
unknown

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3104..3412
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3211_6
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3394..3732)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FND2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX80402.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3211_7
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4079..6070
DNA (1992bp) protein (664aa)
UPI0003CDF4CB related cluster n=1 Tax=unknown RepID=UPI0003CDF4CB rbh
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:ESY62992.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein; K07093 rbh
SCNpilot_cont_500_bf_scaffold_3211_8
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6181..6942)
DNA (762bp) protein (254aa)
sugar ABC transporter permease n=1 Tax=Rhizobium loti RepID=UPI000377DA89 rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
permease, ABC-2-type transport system; K01992 ABC-2 type transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_3211_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6939..7865)
DNA (927bp) protein (309aa)
Putative ABC transporter (ATP binding protein) n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FE75_9RHIZ rbh
Putative transporter subunit: ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDX25132.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ABC-type multidrug transport system, ATPase component rbh
SCNpilot_cont_500_bf_scaffold_3211_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8108..9550
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000380BF1F rbh
secretion protein HlyD; K07799 putative multidrug efflux transporter MdtA
Secretion protein HlyD {ECO:0000313|EMBL:ABE64332.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3211_11
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9547..12663
DNA (3117bp) protein (1039aa)
multidrug transporter n=1 Tax=Rhizobium loti RepID=UPI00037852BA rbh
AcrB/AcrD/AcrF family protein {ECO:0000313|EMBL:AID32200.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
acriflavin resistance protein; K07788 RND superfamily, multidrug transport protein MdtB
SCNpilot_cont_500_bf_scaffold_3211_12
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12660..14066
DNA (1407bp) protein (469aa)
nodulation protein n=1 Tax=Rhizobium loti RepID=UPI0003653A02
Multidrug resistance protein MdtC {ECO:0000313|EMBL:AID32201.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
acriflavin resistance protein; K07789 RND superfamily, multidrug transport protein MdtC
SCNpilot_cont_500_bf_scaffold_3211_13
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14116..15861
DNA (1746bp) protein (582aa)
nodulation protein n=1 Tax=Rhizobium loti RepID=UPI0003653A02
Multidrug resistance protein MdtC {ECO:0000313|EMBL:AID32201.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
acriflavin resistance protein; K07789 RND superfamily, multidrug transport protein MdtC
SCNpilot_cont_500_bf_scaffold_3211_14
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15886..16608
DNA (723bp) protein (241aa)
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NFX3_AFIFE
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein {ECO:0000313|EMBL:EKS29372.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
RND efflux system, outer membrane lipoprotein, NodT
Displaying 14 items

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