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SCNpilot_cont_500_bf_scaffold_7145

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7145_1
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1012)
DNA (1011bp) protein (337aa)
Ribonucleotide-diphosphate reductase subunit alpha {ECO:0000313|EMBL:KFG70447.1}; EC=1.17.4.1 {ECO:0000313|EMBL:KFG70447.1};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
ribonucleotide-diphosphate reductase subunit alpha; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DB8E57
SCNpilot_cont_500_bf_scaffold_7145_2
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1009..1656)
DNA (648bp) protein (216aa)
nrdJ; vitamin B12-dependent ribonucleotide reductase NrdJ (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Afipia sp. 1NLS2 RepID=D6V648_9BRAD
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:EFI51795.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_cont_500_bf_scaffold_7145_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1653..2327)
DNA (675bp) protein (225aa)
Bradyrhizobium elkanii strain UASWS1015 Contig183, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46025.1}; EC=1.17.4.1 {ECO:0000313|EMBL:KIU46025.1};; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
vitamin B12-dependent ribonucleotide reductase; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Vitamin B12-dependent ribonucleotide reductase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G8W8_9BRAD
SCNpilot_cont_500_bf_scaffold_7145_4
unknown

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comp(3166..3429)
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7145_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3627..4463
DNA (837bp) protein (279aa)
Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus B4 RepID=T1XAC4_VARPD
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AGU49882.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_500_bf_scaffold_7145_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4557..5270
DNA (714bp) protein (238aa)
Putative alanyl-tRNA synthetase related protein {ECO:0000313|EMBL:KFC64764.1}; EC=6.1.1.7 {ECO:0000313|EMBL:KFC64764.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Putative alanine/threonine--tRNA ligase n=1 Tax=Variovorax paradoxus B4 RepID=T1XBL9_VARPD rbh
putative alanine/threonine--tRNA ligase rbh
SCNpilot_cont_500_bf_scaffold_7145_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5420..6346
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E8DC4B
ABC transporter, ATPase subunit {ECO:0000313|EMBL:KFC73157.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter; K09687 antibiotic transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_7145_8
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6343..7428
DNA (1086bp) protein (362aa)
ABC-type polysaccharide/polyol phosphate export system, permease component n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HQG4_9RHIZ
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MR1.;"
ABC transporter
SCNpilot_cont_500_bf_scaffold_7145_9
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7436..8176)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2T8B2_BURPP
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
SCNpilot_cont_500_bf_scaffold_7145_10
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8767..9480)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031475D9
Possible SAM-dependent methyltransferase {ECO:0000313|EMBL:EAS50748.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7145_11
unknown

Not on your lists

10049..10396
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7145_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10492..11340
DNA (849bp) protein (283aa)
Putative cystein protease, Transglutaminase-like domain protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ER74_BRASB
Transglutaminase domain protein {ECO:0000313|EMBL:KFC75384.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cysteine protease transglutaminase-like protein
SCNpilot_cont_500_bf_scaffold_7145_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11561..12529
DNA (969bp) protein (323aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110, ECO:0000256|SAAS:SAAS00015955}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_01110, ECO:0000256|SAAS:SAAS00015955};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01110}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
N-acetyl-gamma-glutamyl-phosphate reductase; K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003164653
SCNpilot_cont_500_bf_scaffold_7145_14
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12529..13170
DNA (642bp) protein (214aa)
FMN-binding negative transcriptional regulator n=1 Tax=Ahrensia sp. R2A130 RepID=E0MTK2_9RHOB
Negative transcriptional regulator {ECO:0000313|EMBL:GAN55727.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sakaeratensis NBRC 103193.;"
FMN-binding negative transcriptional regulator; K07734 transcriptional regulator
SCNpilot_cont_500_bf_scaffold_7145_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13207..13770
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07LI4_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ07200.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_cont_500_bf_scaffold_7145_16
bacterium YEK0313, Bacteria

Not on your lists

comp(13825..14676)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D82552
Ureidoglycolate lyase {ECO:0000313|EMBL:CEJ13918.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
5-carboxymethyl-2-hydroxymuconate delta-isomerase rbh
SCNpilot_cont_500_bf_scaffold_7145_17
bacterium YEK0313, Bacteria

Not on your lists

comp(15146..15544)
DNA (399bp) protein (133aa)
poly(R)-hydroxyalkanoic acid synthase; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
poly(3-hydroxyalkanoate) polymerase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000375F93A
Poly-beta-hydroxybutyrate polymerase {ECO:0000313|EMBL:CEJ13147.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Displaying 17 items

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