ggKbase home page

SCNpilot_cont_500_bf_scaffold_2615

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2615_1
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..186)
DNA (186bp) protein (62aa)
hypothetical protein, partial n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036A8AD2
Integrase catalytic subunit {ECO:0000313|EMBL:BAR63262.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
integrase catalytic subunit
SCNpilot_cont_500_bf_scaffold_2615_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

213..1442
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NSD3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33237.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2615_3
bacterium YEK0313, Bacteria

Not on your lists

comp(2096..3652)
DNA (1557bp) protein (519aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YMV5_BRASO rbh
Glutathione-binding protein GsiB {ECO:0000313|EMBL:CEJ15282.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_2615_4
bacterium YEK0313, Bacteria

Not on your lists

comp(3727..4638)
DNA (912bp) protein (304aa)
ABC transporter permease n=1 Tax=Oceanibaculum indicum P24 RepID=K2JCW8_9PROT
Glutathione transport system permease protein GsiD {ECO:0000313|EMBL:CEJ15279.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter permease; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_2615_5
bacterium YEK0313, Bacteria

Not on your lists

comp(4648..5589)
DNA (942bp) protein (314aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QBQ6_9BRAD
Glutathione transport system permease protein GsiC {ECO:0000313|EMBL:CEJ15278.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
peptide ABC transporter permease; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_2615_6
bacterium YEK0313, Bacteria

Not on your lists

5884..6912
DNA (1029bp) protein (343aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J2KVM1_9RHIZ
HTH-type transcriptional repressor PurR {ECO:0000313|EMBL:CEJ15277.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2615_7
bacterium YEK0313, Bacteria

Not on your lists

6915..8348
DNA (1434bp) protein (478aa)
amidase; K01426 amidase [EC:3.5.1.4]
Amidase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H230_9PROT
Acylamidase {ECO:0000313|EMBL:CEJ15276.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_500_bf_scaffold_2615_8
unknown

Not on your lists

comp(8796..8954)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2615_trna_1
unknown

Not on your lists

comp(9053..9123)
DNA (71bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_2615_9
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9261..9521)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J3J8_POLGS
hypothetical protein; K07126
Uncharacterized protein {ECO:0000313|EMBL:ADZ71022.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_500_bf_scaffold_2615_10
unknown

Not on your lists

9980..10930
DNA (951bp) protein (317aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2615_11
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11035..11745)
DNA (711bp) protein (237aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18] rbh
glutathione S-transferase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003152849
Glutathione S-transferase domain {ECO:0000313|EMBL:ABS69023.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_2615_12
unknown

Not on your lists

11886..12218
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2615_13
Xanthomonas fragariae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12336..12626)
DNA (291bp) protein (97aa)
histone n=1 Tax=Bradyrhizobium japonicum RepID=UPI000377F72D
Uncharacterized protein {ECO:0000313|EMBL:ENZ94519.1}; TaxID=1131451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fragariae LMG 25863.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2615_14
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13103..13567)
DNA (465bp) protein (155aa)
GNAT family acetyltransferase n=1 Tax=Streptomyces sp. CNS615 RepID=UPI00036A82F4
GNAT family acetyltransferase {ECO:0000313|EMBL:KIF68923.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
N-acetyltransferase GCN5
SCNpilot_cont_500_bf_scaffold_2615_15
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13564..14019)
DNA (456bp) protein (152aa)
UPF0310 protein NH8B_3659 n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J0A9_PSEUL
hypothetical protein
UPF0310 protein NH8B_3659 {ECO:0000256|HAMAP-Rule:MF_00771}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
SCNpilot_cont_500_bf_scaffold_2615_16
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14025..14129)
DNA (105bp) protein (35aa)
glutamyl-tRNA(Gln) amidotransferase subunit beta; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A9R4_STAND
Displaying 17 items

View Taxonomy