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SCNpilot_cont_500_bf_scaffold_816

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_816_1
unknown

Not on your lists

2..70
DNA (69bp) protein (23aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_816_2
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67..231
DNA (165bp) protein (55aa)
DNA repair protein radc n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNV7_9RHIZ
DNA repair protein radc {ECO:0000313|EMBL:EIM25649.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
DNA repair protein RadC; K03630 DNA repair protein RadC
SCNpilot_cont_500_bf_scaffold_816_3
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

441..683
DNA (243bp) protein (81aa)
protein usg n=1 Tax=Methylocystis parvus RepID=UPI0002EEE77C
Usg family protein
Usg family protein {ECO:0000313|EMBL:CCJ08035.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_cont_500_bf_scaffold_816_4
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

764..1360
DNA (597bp) protein (199aa)
Putative ABC-type transport system, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNV8_9RHIZ
Putative ABC-type transport system, permease component {ECO:0000313|EMBL:EIM25650.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
exopolysaccharide synthesis ExoD
SCNpilot_cont_500_bf_scaffold_816_5
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1364..2119)
DNA (756bp) protein (252aa)
Putative proteasome-type protease n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UHP2_METS4
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ47889.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
putative proteasome-type protease; K07395 putative proteasome-type protease
SCNpilot_cont_500_bf_scaffold_816_6
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2176..3426)
DNA (1251bp) protein (417aa)
UPI0003CE331B related cluster n=1 Tax=unknown RepID=UPI0003CE331B rbh
RNA polymerase sigma70 factor {ECO:0000313|EMBL:ESY64215.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
putative RNA polymerase sigma factor containing a TPR repeat domain rbh
SCNpilot_cont_500_bf_scaffold_816_7
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3426..3782)
DNA (357bp) protein (119aa)
UPI0003CE9E8B related cluster n=1 Tax=unknown RepID=UPI0003CE9E8B
PhnB protein {ECO:0000313|EMBL:KFC61809.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_816_8
bacterium YEK0313, Bacteria

Not on your lists

comp(3878..4702)
DNA (825bp) protein (275aa)
Transglutaminase domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0C3_STAND
Protein-glutamine gamma-glutamyltransferase {ECO:0000313|EMBL:CEJ13637.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
transglutaminase
SCNpilot_cont_500_bf_scaffold_816_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4713..5654)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UHN9_METS4
Uncharacterized protein {ECO:0000313|EMBL:KFC67610.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_816_10
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5757..7175)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) PF5_METNO">RepID=B8IPF5_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL62247.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_500_bf_scaffold_816_11
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7435..8163
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M1I9_METRJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB27572.1}; Flags: Precursor;; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_cont_500_bf_scaffold_816_12
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8227..8505
DNA (279bp) protein (93aa)
Putative addiction module antidote protein, CC2985 family n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KM96_MESAW
Putative CopG/Arc/MetJ family addiction module antidote protein {ECO:0000313|EMBL:CDX29628.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
putative addiction module antidote protein, CC2985 family
SCNpilot_cont_500_bf_scaffold_816_13
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8478..8816
DNA (339bp) protein (113aa)
Plasmid stabilization system protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KL11_MESAW
plasmid stabilization system protein
Plasmid stabilization system protein {ECO:0000313|EMBL:AGB45776.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_500_bf_scaffold_816_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8820..9998)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031D7B55
Aminotransferase class I {ECO:0000313|EMBL:KFC74349.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
aminotransferase
SCNpilot_cont_500_bf_scaffold_816_15
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10000..11205)
DNA (1206bp) protein (402aa)
FAD-binding monooxygenase; K00480 salicylate hydroxylase [EC:1.14.13.1] rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DA0A61 rbh
Monooxygenase FAD-binding {ECO:0000313|EMBL:ACA21003.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_500_bf_scaffold_816_16
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11224..11484)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000377FECA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELT47666.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
SCNpilot_cont_500_bf_scaffold_816_17
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11652..12497
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00036A14DB
DNA-binding protein {ECO:0000313|EMBL:ETR78354.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein; K03699 putative hemolysin
SCNpilot_cont_500_bf_scaffold_816_18
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12437..12898
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0STK7_9BRAD
hypothetical protein; K03699 putative hemolysin
Uncharacterized protein {ECO:0000313|EMBL:CCD97534.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
SCNpilot_cont_500_bf_scaffold_816_19
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12931..13707
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DE7B49
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EIM30558.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_500_bf_scaffold_816_20
bacterium YEK0313, Bacteria

Not on your lists

13704..14570
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI000373056C
Haloalkane dehalogenase {ECO:0000313|EMBL:CEJ13629.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_816_21
unknown

Not on your lists

comp(14421..14747)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_816_22
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14876..15712
DNA (837bp) protein (279aa)
cysE; serine acetyltransferase; K00640 serine O-acetyltransferase [EC:2.3.1.30]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031C1FAE rbh
Putative Serine acetyltransferase {ECO:0000313|EMBL:KGJ71168.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCNpilot_cont_500_bf_scaffold_816_23
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15896..16105
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J5PLY7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW11652.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_816_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16210..16896)
DNA (687bp) protein (229aa)
hypothetical protein, partial n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036E8C40
Uncharacterized protein {ECO:0000313|EMBL:KFC67581.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_816_25
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17014..17343
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IFM4_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL57759.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_500_bf_scaffold_816_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17505..17927)
DNA (423bp) protein (141aa)
inosine-5-monophosphate dehydrogenase n=1 Tax=Methylobacterium sp. 88A RepID=UPI0003781A02
signal-transduction protein
Putative signal-transduction protein {ECO:0000313|EMBL:KFC67574.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_816_27
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18115..18945)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003195607
GlpG protein {ECO:0000313|EMBL:BAQ43755.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
rhomboid family protein
SCNpilot_cont_500_bf_scaffold_816_28
unknown

Not on your lists

19285..19833
DNA (549bp) protein (183aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_816_29
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19964..20572
DNA (609bp) protein (203aa)
Type IV pilus assembly PilZ n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQF4_METS4
type IV pilus assembly PilZ
Type IV pilus assembly PilZ {ECO:0000313|EMBL:ACA17640.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_500_bf_scaffold_816_30
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20807..21439
DNA (633bp) protein (211aa)
Transglutaminase family protein cysteine peptidase BTLCP n=2 Tax=Rhodopseudomonas palustris RepID=B3QE55_RHOPT
transglutaminase
Uncharacterized protein {ECO:0000313|EMBL:CAE28862.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
Displaying items 1-30 of 101 in total

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