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SCNpilot_cont_500_bf_scaffold_1360

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1360_1
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..821
DNA (819bp) protein (273aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
acetyl-CoA synthetase; K01895 acetyl-CoA synthetase [EC:6.2.1.1]
Acetyl-coenzyme A synthetase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMT9_9RHIZ
SCNpilot_cont_500_bf_scaffold_1360_2
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1041..1568
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00037E65A5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH90020.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_1360_3
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1573..2808
DNA (1236bp) protein (412aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=8
radical SAM enzyme, Cfr family; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003629DC2
SCNpilot_cont_500_bf_scaffold_1360_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2805..3296
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMX0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC62914.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_1360_5
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3300..3941)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D6FA54
Threonine transporter RhtB {ECO:0000313|EMBL:KFG70676.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
lysine exporter protein LysE/YggA
SCNpilot_cont_500_bf_scaffold_1360_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4117..5859)
DNA (1743bp) protein (581aa)
Gamma-glutamyltransferase {ECO:0000313|EMBL:KFC62915.1}; EC=2.3.2.2 {ECO:0000313|EMBL:KFC62915.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Gamma-glutamyltranspeptidase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YU17_9RHIZ rbh
ggt; gamma-glutamyltranspeptidase
SCNpilot_cont_500_bf_scaffold_1360_7
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5974..6591
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QLR7_METTR
Methanol dehydrogenase {ECO:0000313|EMBL:ETR75153.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein; K08988 putative membrane protein
SCNpilot_cont_500_bf_scaffold_1360_8
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6610..7353)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SR49_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD96676.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1360_9
bacterium YEK0313, Bacteria

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comp(7466..10192)
DNA (2727bp) protein (909aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
aconitate hydratase; K01681 aconitate hydratase 1 [EC:4.2.1.3]
aconitate hydratase n=1 Tax=Methyloferula stellata RepID=UPI00036F15AD
SCNpilot_cont_500_bf_scaffold_1360_10
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10491..11153
DNA (663bp) protein (221aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
heme exporter protein CcmA; K02193 heme exporter protein A [EC:3.6.3.41]
cytochrome C biogenesis protein CcmA n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B6B2A7
SCNpilot_cont_500_bf_scaffold_1360_11
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11150..11818
DNA (669bp) protein (223aa)
Heme exporter protein B n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UCJ4_METS4
heme exporter protein CcmB; K02194 heme exporter protein B
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_500_bf_scaffold_1360_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11896..12873
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z033_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC73140.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1360_13
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12896..13843)
DNA (948bp) protein (316aa)
Cyclohexadienyl dehydrogenase {ECO:0000313|EMBL:KFG66774.1}; EC=1.3.1.12 {ECO:0000313|EMBL:KFG66774.1};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
arogenate dehydrogenase (EC:1.3.1.43); K00220 cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] rbh
Prephenate dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMB3_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_1360_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13836..14945)
DNA (1110bp) protein (370aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
histidinol-phosphate aminotransferase n=1 Tax=Xanthobacteraceae RepID=UPI000362930C rbh
SCNpilot_cont_500_bf_scaffold_1360_15
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14986..15861)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000312AD1F rbh
Chorismate mutase {ECO:0000313|EMBL:EIM25107.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1360_16
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16026..17198
DNA (1173bp) protein (391aa)
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070942};; Homoserine O-trans-acetylase {ECO:0000256|HAMAP-Rule:MF_00296}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
homoserine O-acetyltransferase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000303657F
homoserine O-acetyltransferase
SCNpilot_cont_500_bf_scaffold_1360_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17195..17830
DNA (636bp) protein (212aa)
methionine biosynthesis MetW n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000362E038
Methionine biosynthesis protein MetW {ECO:0000313|EMBL:KFC75433.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
methionine biosynthesis protein MetW
SCNpilot_cont_500_bf_scaffold_1360_18
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17864..18760)
DNA (897bp) protein (299aa)
Tyrosine recombinase XerD n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EM11_METSB
integrase family protein; K04763 integrase/recombinase XerD
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_500_bf_scaffold_1360_19
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18952..19563
DNA (612bp) protein (204aa)
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71]
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037ECAB2
SCNpilot_cont_500_bf_scaffold_1360_20
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19563..20693
DNA (1131bp) protein (377aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
3-dehydroquinate synthase; K01735 3-dehydroquinate synthase [EC:4.2.3.4]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030AA864
SCNpilot_cont_500_bf_scaffold_1360_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20705..22015
DNA (1311bp) protein (437aa)
membrane protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034BED34
Uncharacterized protein {ECO:0000313|EMBL:KFC63592.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1360_22
unknown

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comp(22138..22206)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 22 items

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