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SCNpilot_cont_500_bf_scaffold_1560

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1560_1
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..238)
DNA (237bp) protein (79aa)
ATP-dependent Clp protease ATP-binding subunit clpA n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLA6_9RHIZ
ATP-dependent Clp protease ATP-binding subunit clpA {ECO:0000313|EMBL:EIM24748.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
ATP-dependent Clp protease ATP-binding protein ClpA; K03694 ATP-dependent Clp protease ATP-binding subunit ClpA
SCNpilot_cont_500_bf_scaffold_1560_2
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(260..649)
DNA (390bp) protein (130aa)
ATP-dependent Clp protease adaptor protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HYA7_AZOC5
clpS; ATP-dependent Clp protease adaptor protein; K06891 ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_1560_3
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(859..1188)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E870EA
Phasin family protein {ECO:0000313|EMBL:ESY68828.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
phasin family protein
SCNpilot_cont_500_bf_scaffold_1560_4
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1495..2946
DNA (1452bp) protein (484aa)
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 (EC:3.4.16.4); K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLA3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFG68359.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
SCNpilot_cont_500_bf_scaffold_1560_5
unknown

Not on your lists

2956..3207
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1560_6
unknown

Not on your lists

comp(3213..3557)
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1560_7
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3569..3910)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLA0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFG68356.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
SCNpilot_cont_500_bf_scaffold_1560_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3999..4439)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F96FC5
Uncharacterized protein {ECO:0000313|EMBL:KFC67461.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1560_9
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4513..5910)
DNA (1398bp) protein (466aa)
amidase (EC:3.5.1.4)
Amidase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TPH5_9PROT rbh
Amidase {ECO:0000313|EMBL:EDP65222.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
SCNpilot_cont_500_bf_scaffold_1560_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6055..6669
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000380A86E
Cation efflux protein {ECO:0000313|EMBL:KFC67465.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1560_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6666..8675
DNA (2010bp) protein (670aa)
carbamoyl-phosphate synthase L chain ATP-binding; K01968 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] rbh
carbamoyl-phosphate synthase subunit L n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000305F6C9
3-methylcrotonyl-CoA carboxylase alpha subunit {ECO:0000313|EMBL:KFC67464.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_1560_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8813..9568)
DNA (756bp) protein (252aa)
short-chain alcohol dehydrogenase (EC:1.-.-.-)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F3E846 rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KFC67466.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_1560_13

Not on your lists

comp(9623..10312)
DNA (690bp) protein (230aa)
L-fuculose phosphate aldolase n=1 Tax=mine drainage metagenome RepID=T0ZNM0_9ZZZZ
L-fuculose phosphate aldolase {ECO:0000313|EMBL:EQD46273.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
fucA; l-fuculose-1-phosphate aldolase
SCNpilot_cont_500_bf_scaffold_1560_14
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10313..11407)
DNA (1095bp) protein (365aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
Methylthioribose-1-phosphate isomerase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GPM5_9PROT
mtnA; 5-methylthioribose-1-phosphate isomerase (MTNA)
SCNpilot_cont_500_bf_scaffold_1560_15
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11503..13293)
DNA (1791bp) protein (597aa)
Kef-type K+ transport system, predicted NAD-binding component n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HSA2_9RHIZ
Kef-type K+ transport system, predicted NAD-binding component {ECO:0000313|EMBL:EJN04008.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
potassium efflux system protein; K03455 monovalent cation:H+ antiporter-2, CPA2 family
SCNpilot_cont_500_bf_scaffold_1560_16
unknown

Not on your lists

13485..13631
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1560_17
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13807..14052
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037B0C69
bacterioferritin-associated ferredoxin
Bacterioferritin-associated ferredoxin {ECO:0000313|EMBL:BAF88245.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_1560_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14157..14669
DNA (513bp) protein (171aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Bacterioferritin n=1 Tax=Afipia felis ATCC 53690 RepID=K8NEM2_AFIFE
bacterioferritin; K03594 bacterioferritin
SCNpilot_cont_500_bf_scaffold_1560_19
unknown

Not on your lists

comp(14744..15031)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1560_20
bacterium YEK0313, Bacteria

Not on your lists

comp(15185..16021)
DNA (837bp) protein (279aa)
type 11 methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
Methyltransferase type 11 n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TK62_MESCW
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:CEJ12847.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_500_bf_scaffold_1560_21
unknown

Not on your lists

comp(16096..16563)
DNA (468bp) protein (156aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1560_22
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16638..18284)
DNA (1647bp) protein (549aa)
carboxyl transferase (EC:6.4.1.3); K01969 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) n=1 Tax=Microvirga sp. WSM3557 RepID=I4YKQ1_9RHIZ
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:KFG68573.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
SCNpilot_cont_500_bf_scaffold_1560_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18441..19841
DNA (1401bp) protein (467aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
class II fumarate hydratase; K01679 fumarate hydratase, class II [EC:4.2.1.2]
Fumarate hydratase class II n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IF16_METNO
SCNpilot_cont_500_bf_scaffold_1560_24
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19908..20822
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZR9_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM29461.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_500_bf_scaffold_1560_25
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20977..21792
DNA (816bp) protein (272aa)
UPI0003CEFC94 related cluster n=1 Tax=unknown RepID=UPI0003CEFC94
Membrane protein {ECO:0000313|EMBL:ESW86925.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1560_26
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21841..22551)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000365F23B rbh
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:EUB98937.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
dimethylmenaquinone methyltransferase rbh
SCNpilot_cont_500_bf_scaffold_1560_27
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22844..24328
DNA (1485bp) protein (495aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] rbh
DNA helicase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00037EAFA0 rbh
Replicative DNA helicase {ECO:0000313|EMBL:ACA17033.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_500_bf_scaffold_1560_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24394..25500
DNA (1107bp) protein (369aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] rbh
Alanine racemase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=ALR_METNO rbh
SCNpilot_cont_500_bf_scaffold_1560_29
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25519..25878)
DNA (360bp) protein (120aa)
uroporphyrin-III C-methyltransferase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003744B82
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEC77437.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
SCNpilot_cont_500_bf_scaffold_1560_30
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25895..26200)
DNA (306bp) protein (102aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IJE2_9BRAD
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
clpS; ATP-dependent Clp protease adaptor; K06891 ATP-dependent Clp protease adaptor protein ClpS
Displaying items 1-30 of 54 in total

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