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SCNpilot_cont_500_bf_scaffold_1563

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1563_1
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1337
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00036A2E7D
Replication protein C {ECO:0000313|EMBL:CCD31929.2}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
replication initiation protein RepC
SCNpilot_cont_500_bf_scaffold_1563_2
bacterium YEK0313, Bacteria

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3150..3308
DNA (159bp) protein (53aa)
N-methylhydantoinase (ATP-hydrolyzing) B 2 (EC:3.5.2.14); K01474 N-methylhydantoinase B [EC:3.5.2.14]
N-methylhydantoinase (ATP-hydrolyzing) B 2 n=1 Tax=Ketogulonicigenium vulgare (strain WSH-001) RepID=F9YBS5_KETVW
Acetophenone carboxylase delta subunit {ECO:0000313|EMBL:CEJ11809.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_500_bf_scaffold_1563_3
bacterium YEK0313, Bacteria

Not on your lists

3295..5328
DNA (2034bp) protein (678aa)
5-oxoprolinase (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] rbh
Hydantoin utilization protein n=2 Tax=Ketogulonicigenium vulgare RepID=E3F600_KETVY rbh
Acetophenone carboxylase gamma subunit {ECO:0000313|EMBL:CEJ11808.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_500_bf_scaffold_1563_4
bacterium YEK0313, Bacteria

Not on your lists

5349..6752
DNA (1404bp) protein (468aa)
Putative Peptidase, M20/M25/M40 family n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S2D6_9BRAD rbh
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:CEJ11807.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative Peptidase, M20/M25/M40 family rbh
SCNpilot_cont_500_bf_scaffold_1563_5
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6799..7935
DNA (1137bp) protein (379aa)
M20 family peptidase (EC:3.4.-.-); K01295 glutamate carboxypeptidase [EC:3.4.17.11] rbh
Putative peptidase M20 family {ECO:0000313|EMBL:ABQ32355.1}; EC=3.4.-.- {ECO:0000313|EMBL:ABQ32355.1};; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
Putative peptidase M20 family n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5E861_BRASB rbh
SCNpilot_cont_500_bf_scaffold_1563_6
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8032..9819)
DNA (1788bp) protein (596aa)
Peptidase, M28 family protein (EC:3.4.17.21) rbh
Peptidase, M28 family protein {ECO:0000313|EMBL:AEM42821.1}; EC=3.4.17.21 {ECO:0000313|EMBL:AEM42821.1};; TaxID=759362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain WSH-001).;"
Peptidase, M28 family protein n=1 Tax=Ketogulonicigenium vulgare (strain WSH-001) RepID=F9YBR9_KETVW rbh
SCNpilot_cont_500_bf_scaffold_1563_7
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9999..11702
DNA (1704bp) protein (568aa)
Extracellular solute-binding protein, family 5 n=1 Tax=Rhizobium sp. CF080 RepID=J2TJ56_9RHIZ rbh
Twin-arginine translocation pathway signal protein {ECO:0000313|EMBL:KGD96315.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
Twin-arginine translocation pathway signal rbh
SCNpilot_cont_500_bf_scaffold_1563_8
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11764..12741
DNA (978bp) protein (326aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=Ketogulonicigenium vulgare RepID=E3F5Z4_KETVY rbh
Peptide ABC transporter permease {ECO:0000313|EMBL:KAJ55362.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium mucosum KCTC 23349.;"
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_1563_9
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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12725..13648
DNA (924bp) protein (308aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=2 Tax=Ketogulonicigenium vulgare RepID=E3F5Z5_KETVY rbh
dipeptide/oligopeptide/nickel ABC transporter permease; K02034 peptide/nickel transport system permease protein rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ADO44389.1}; TaxID=880591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain Y25).;"
SCNpilot_cont_500_bf_scaffold_1563_10
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13821..14657
DNA (837bp) protein (279aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Ketogulonicigenium vulgare (strain WSH-001) RepID=F9YBS3_KETVW rbh
Peptide ABC transporter ATPase {ECO:0000313|EMBL:KAJ55360.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium mucosum KCTC 23349.;"
Oligopeptide/dipeptide ABC transporter, ATPase subunit rbh
SCNpilot_cont_500_bf_scaffold_1563_11
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14645..15628
DNA (984bp) protein (328aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Rhizobium sp. CF080 RepID=J2HJX9_9RHIZ rbh
Oligopeptide ABC transporter {ECO:0000313|EMBL:CDN51344.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
oligopeptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_1563_12
uncultured gamma proteobacterium HF4000_06A21, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15670..16863
DNA (1194bp) protein (398aa)
Imidazolonepropionase and related amidohydrolases n=1 Tax=uncultured gamma proteobacterium HF4000_06A21 RepID=E7C836_9GAMM
Imidazolonepropionase and related amidohydrolases {ECO:0000313|EMBL:ADI23610.1}; TaxID=723581 species="Bacteria; Proteobacteria; Gammaproteobacteria; environmental samples.;" source="uncultured gamma proteobacterium HF4000_06A21.;"
Aryldialkylphosphatase related protein
SCNpilot_cont_500_bf_scaffold_1563_13
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16882..17655)
DNA (774bp) protein (258aa)
IclR family transcriptional regulator n=2 Tax=Ketogulonicigenium vulgare RepID=E3F5Y6_KETVY
IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:ADO44380.1}; TaxID=880591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain Y25).;"
SCNpilot_cont_500_bf_scaffold_1563_14
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17812..19509
DNA (1698bp) protein (566aa)
Peptidase, M28 family protein n=2 Tax=Ketogulonicigenium vulgare RepID=F9YBR3_KETVW rbh
Peptidase, M28 family protein rbh
Putative peptidase {ECO:0000313|EMBL:ADO44378.1}; TaxID=880591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain Y25).;"
SCNpilot_cont_500_bf_scaffold_1563_15
Peptococcaceae bacterium BRH_c4a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19596..20846)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000318C56D rbh
Uncharacterized protein {ECO:0000313|EMBL:KJR96262.1}; TaxID=1629716 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4a.;"
ABC branched chain amino acid transporter, periplasmic ligandbinding protein
SCNpilot_cont_500_bf_scaffold_1563_16
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20985..23837)
DNA (2853bp) protein (951aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000373F409 rbh
Putative iron(III)-transport system permease {ECO:0000313|EMBL:KHQ51704.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
iron(III)-transport system permease; K02011 iron(III) transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_1563_17
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23891..24385)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003775C39
Uncharacterized protein {ECO:0000313|EMBL:KGJ08965.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
Displaying 17 items

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