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SCNpilot_cont_500_bf_scaffold_3821

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3821_1
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..283)
DNA (282bp) protein (94aa)
AMP-dependent synthetase and ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00038256FD
Acyl-CoA ligase {ECO:0000313|EMBL:CQD18002.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;"
SCNpilot_cont_500_bf_scaffold_3821_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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713..1462
DNA (750bp) protein (250aa)
Putative oxidoreductase, SDR family n=1 Tax=Variovorax paradoxus B4 RepID=T1X4N3_VARPD
putative oxidoreductase, SDR family
Putative oxidoreductase, SDR family {ECO:0000313|EMBL:AGU47563.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_500_bf_scaffold_3821_3
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1806..2975
DNA (1170bp) protein (390aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
Acetyl-CoA acetyltransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMD0_PUSST rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AEC19035.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
SCNpilot_cont_500_bf_scaffold_3821_4
unknown

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3773..3964
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3821_5
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3872..5065)
DNA (1194bp) protein (398aa)
Extracellular ligand-binding receptor n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SIA4_THEM7
Uncharacterized protein {ECO:0000313|EMBL:AIY03103.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_3821_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5104..5814)
DNA (711bp) protein (237aa)
Branched-chain amino acid ABC transporter, ATP-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XMF5_VARPD
branched-chain amino acid ABC transporter, ATP-binding protein
Branched-chain amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGU53783.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_500_bf_scaffold_3821_7
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5811..7670)
DNA (1860bp) protein (620aa)
Branched-chain amino acid transport system permease protein LivM/branched-chain amino acid transport ATP-binding protein livG n=1 Tax=Thermus scotoductus (strain ATCC 700910 / SA-01) RepID=E8PPT5_THESS
Uncharacterized protein {ECO:0000313|EMBL:AIY03101.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
branched-chain amino acid transport system permease LivM/branched-chain amino acid transport ATP-binding protein livG; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_3821_8
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7660..8661)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI00030FC6DA
Uncharacterized protein {ECO:0000313|EMBL:AIY03102.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_3821_9
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8690..9442
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0KBY8_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJC75049.1}; Flags: Precursor;; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_3821_10
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9536..10237
DNA (702bp) protein (234aa)
Soluble epoxide hydrolase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NSD7_GRAMM
Contig85, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75744.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
soluble epoxide hydrolase
SCNpilot_cont_500_bf_scaffold_3821_11
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10471..11262
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EEF0A2
Type I secretion system ATPase {ECO:0000313|EMBL:EHH13877.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
type I secretion system ATPase
SCNpilot_cont_500_bf_scaffold_3821_12
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11259..11846
DNA (588bp) protein (196aa)
Type I secretion membrane fusion protein, HlyD family n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZBA5_METPB
HlyD family type I secretion membrane fusion protein; K02022 HlyD family secretion protein
Type I secretion membrane fusion protein, HlyD family {ECO:0000313|EMBL:ACB80701.1}; Flags: Precursor;; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
Displaying 12 items

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