ggKbase home page

SCNpilot_cont_500_bf_scaffold_6047

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6047_1
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..640)
DNA (639bp) protein (213aa)
Inner-membrane translocator n=1 Tax=Oceanibaculum indicum P24 RepID=K2K0M3_9PROT
Inner-membrane translocator {ECO:0000313|EMBL:EKE76299.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_6047_2
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(665..1843)
DNA (1179bp) protein (393aa)
Extracellular ligand-binding receptor n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X203_9BURK
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EON13566.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_6047_3
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1927..3144)
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Gordonia kroppenstedtii RepID=UPI00035D652A
hydrolase/M24 family peptidase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCNpilot_cont_500_bf_scaffold_6047_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3316..4140
DNA (825bp) protein (275aa)
TetR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00036B6E0D
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACS18514.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_500_bf_scaffold_6047_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4137..4739
DNA (603bp) protein (201aa)
NADPH-dependent FMN reductase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRS5_PARL1
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:ABS62608.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_500_bf_scaffold_6047_6
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5003..6652)
DNA (1650bp) protein (550aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LF26_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL30599.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_6047_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6642..6884)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WSC4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL30600.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6047_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6877..7263)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CGX2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL30601.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
Displaying 8 items

View Taxonomy