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SCNpilot_cont_500_bf_scaffold_4603

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4603_1
unknown

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2..70
DNA (69bp) protein (23aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4603_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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353..2671
DNA (2319bp) protein (773aa)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:AEA28581.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AEA28581.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Peptidoglycan glycosyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV35_PSEUX rbh
peptidoglycan glycosyltransferase rbh
SCNpilot_cont_500_bf_scaffold_4603_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2731..3261
DNA (531bp) protein (177aa)
Peptidase C14, caspase catalytic subunit P20 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV34_PSEUX
peptidase C14, caspase catalytic subunit P20
Peptidase C14, caspase catalytic subunit P20 {ECO:0000313|EMBL:AEA28580.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_4603_4
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3331..5340
DNA (2010bp) protein (670aa)
dTMP kinase {ECO:0000256|SAAS:SAAS00031932}; EC=2.7.4.9 {ECO:0000256|SAAS:SAAS00031932};; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
Permease, MFS-type n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JNR9_SACES rbh
Permease, MFS-type rbh
SCNpilot_cont_500_bf_scaffold_4603_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5337..6488
DNA (1152bp) protein (384aa)
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] rbh
DNA polymerase III, delta prime subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV33_PSEUX rbh
DNA polymerase III, delta prime subunit {ECO:0000313|EMBL:AEA28579.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_4603_trna_1
unknown

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6562..6635
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_4603_6
unknown

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comp(6645..6923)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00035E20C5
SCNpilot_cont_500_bf_scaffold_4603_7
Streptomyces sp. JS01, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6913..8172)
DNA (1260bp) protein (420aa)
hypothetical protein n=1 Tax=Streptomyces sp. CcalMP-8W RepID=UPI0003811E37 rbh
Integrase {ECO:0000313|EMBL:KFK90177.1}; TaxID=1525753 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. JS01.;"
integrase rbh
SCNpilot_cont_500_bf_scaffold_4603_8
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(8169..8357)
DNA (189bp) protein (63aa)
DNA binding domain protein, excisionase family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X725_NAKMY
excisionase family DNA binding domain-containing protein
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:ACV76894.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_500_bf_scaffold_4603_9
unknown

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comp(8354..8518)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4603_10
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8515..9822)
DNA (1308bp) protein (436aa)
Cell division protein FtsK n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NFX9_9ACTO
cell division protein FtsK/SpoIIIE; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
Cell division protein FtsK/SpoIIIE {ECO:0000313|EMBL:ADH66040.1}; Flags: Precursor;; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
SCNpilot_cont_500_bf_scaffold_4603_11
unknown

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comp(9819..9977)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4603_12
unknown

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comp(9970..10392)
DNA (423bp) protein (141aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4603_13
unknown

Not on your lists

comp(10392..10784)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036492B1
SCNpilot_cont_500_bf_scaffold_4603_14
Mycobacterium chelonae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10912..11688)
DNA (777bp) protein (259aa)
GntR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE81D rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:AKC37856.1}; TaxID=1774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chelonae.;"
regulatory protein rbh
SCNpilot_cont_500_bf_scaffold_4603_15
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11767..12195
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Mycobacterium ulcerans (strain Agy99) RepID=A0PLK4_MYCUA
NUDIX hydrolase {ECO:0000313|EMBL:KKC06264.1}; TaxID=244292 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4603_16
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12427..13992)
DNA (1566bp) protein (522aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1907 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
UvrD/REP helicase; K03656 ATP-dependent DNA helicase Rep [EC:3.6.4.12]
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YZI1_9ACTN
SCNpilot_cont_500_bf_scaffold_4603_17
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13955..14677)
DNA (723bp) protein (241aa)
ATP-dependent OLD family endonuclease n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B0ED
Uncharacterized protein {ECO:0000313|EMBL:AIR96750.1}; TaxID=1907 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
Displaying 18 items

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