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SCNpilot_cont_500_bf_scaffold_2587

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2587_1
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..521)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V1D2_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EID53935.1}; Flags: Precursor;; TaxID=882086 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora xinjiangensis XJ-54.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2587_2
unknown

Not on your lists

comp(567..692)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2587_3
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(705..1802)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00035EE37F
OmpA/MotB domain-containing protein; K03286 OmpA-OmpF porin, OOP family
OmpA/MotB domain protein {ECO:0000313|EMBL:ADB33964.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_500_bf_scaffold_2587_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2135..2899
DNA (765bp) protein (255aa)
3-oxoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] rbh
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEA25315.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEA25315.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT16_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_2587_5
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2899..4146
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F258_MODMB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH89721.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
SCNpilot_cont_500_bf_scaffold_2587_6
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4141..5535)
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE070 rbh
Uncharacterized protein {ECO:0000313|EMBL:AIJ22945.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2587_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5546..7207)
DNA (1662bp) protein (554aa)
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC {ECO:0000313|EMBL:AEA25317.1}; EC=3.6.3.44 {ECO:0000313|EMBL:AEA25317.1};; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT18_PSEUX rbh
cysteine ABC transporter permease/ATP-binding protein CydC; K16012 ATP-binding cassette, subfamily C, bacterial CydC rbh
SCNpilot_cont_500_bf_scaffold_2587_8
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7222..8910)
DNA (1689bp) protein (563aa)
ABC transporter, ATP-binding protein n=2 Tax=Thermobifida fusca RepID=Q47S93_THEFY rbh
ABC transporter ATP-binding protein; K16013 ATP-binding cassette, subfamily C, bacterial CydD rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AAZ54674.1}; Flags: Precursor;; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
SCNpilot_cont_500_bf_scaffold_2587_9
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8907..9890)
DNA (984bp) protein (328aa)
cytochrome bd ubiquinol oxidase, subunit II; K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-]
Cytochrome bd ubiquinol oxidase, subunit II n=2 Tax=Thermobifida fusca RepID=Q47S92_THEFY
Cytochrome bd ubiquinol oxidase, subunit II {ECO:0000313|EMBL:AAZ54675.1}; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
SCNpilot_cont_500_bf_scaffold_2587_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9901..11304)
DNA (1404bp) protein (468aa)
cytochrome bd ubiquinol oxidase subunit I; K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-] rbh
Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT21_PSEUX rbh
Cytochrome bd ubiquinol oxidase subunit I {ECO:0000313|EMBL:AEA25320.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2587_11
unknown

Not on your lists

11465..11680
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2587_12
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11680..12588
DNA (909bp) protein (303aa)
ApbE-like thiamine biosynthesis lipoprotein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WAI3_9ACTO rbh
ApbE-like thiamine biosynthesis lipoprotein rbh
ApbE-like thiamine biosynthesis lipoprotein {ECO:0000313|EMBL:AGZ44956.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_500_bf_scaffold_2587_13
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12585..14252
DNA (1668bp) protein (556aa)
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W736_9ACTO rbh
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit rbh
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit {ECO:0000313|EMBL:AGZ44954.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_500_bf_scaffold_2587_14
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14249..14458
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B4F66E
Oxidoreductase {ECO:0000313|EMBL:KDQ03577.1}; TaxID=334542 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii.;"
ferredoxin
SCNpilot_cont_500_bf_scaffold_2587_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14517..16379
DNA (1863bp) protein (621aa)
methylmalonyl-CoA mutase; K01847 methylmalonyl-CoA mutase [EC:5.4.99.2] rbh
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:AEA25321.1}; EC=5.4.99.2 {ECO:0000313|EMBL:AEA25321.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Methylmalonyl-CoA mutase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT22_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_2587_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16444..18612
DNA (2169bp) protein (723aa)
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:AEA25322.1}; EC=5.4.99.2 {ECO:0000313|EMBL:AEA25322.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
methylmalonyl-CoA mutase large subunit; K01847 methylmalonyl-CoA mutase [EC:5.4.99.2] rbh
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT23_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_2587_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18682..19671
DNA (990bp) protein (330aa)
LAO/AO transport system ATPase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] rbh
LAO/AO transport system ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT24_PSEUX rbh
LAO/AO transport system ATPase {ECO:0000313|EMBL:AEA25323.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2587_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19717..20592
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT27_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA25326.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2587_19
unknown

Not on your lists

comp(21020..21301)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2587_20
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21775..22533)
DNA (759bp) protein (253aa)
3-ketoacyl-(acyl-carrier-protein) reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] rbh
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00035F1CF7 rbh
Uncharacterized protein {ECO:0000313|EMBL:EID54784.1}; TaxID=882086 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora xinjiangensis XJ-54.;"
SCNpilot_cont_500_bf_scaffold_2587_21
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22544..23263)
DNA (720bp) protein (240aa)
oxidoreductase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEAA9 rbh
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AGS67826.1}; TaxID=1214242 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus Tu 365.;"
SCNpilot_cont_500_bf_scaffold_2587_22
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23264..23416)
DNA (153bp) protein (51aa)
Oxidoreductase molybdopterin binding n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X843_NAKMY
oxidoreductase molybdopterin binding; K07147
Oxidoreductase molybdopterin binding {ECO:0000313|EMBL:ACV77019.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying 22 items

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