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SCNpilot_cont_500_bf_scaffold_2635

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2635_1
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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298..1335
DNA (1038bp) protein (346aa)
Uncharacterized protein n=22 Tax=Mycobacterium abscessus RepID=B1MG33_MYCA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIC61638.1}; TaxID=1158135 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus M94.;"
SCNpilot_cont_500_bf_scaffold_2635_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1547..1918
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WF49_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98090.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative O-methyltransferase
SCNpilot_cont_500_bf_scaffold_2635_3
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1924..2832)
DNA (909bp) protein (303aa)
LysR family transcriptional regulator n=1 Tax=Patulibacter americanus RepID=UPI0003B3B046
Predicted protein {ECO:0000313|EMBL:EFL07950.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
LysR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2635_4
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2840..3655)
DNA (816bp) protein (272aa)
Low temperature requirement A n=2 Tax=Saccharopolyspora erythraea RepID=A4FAY6_SACEN
low temperature requirement A
Low temperature requirement A {ECO:0000313|EMBL:CAM01211.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
SCNpilot_cont_500_bf_scaffold_2635_5
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4307..4708
DNA (402bp) protein (134aa)
Putative transcriptional regulator, TetR family n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AXD0_STRRD
TetR family transcriptional regulator
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:AHH19006.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
SCNpilot_cont_500_bf_scaffold_2635_6
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4622..5623)
DNA (1002bp) protein (334aa)
aldo/keto reductase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B41692 rbh
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ABW13177.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
SCNpilot_cont_500_bf_scaffold_2635_7
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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5724..6569
DNA (846bp) protein (282aa)
XRE family transcriptional regulator n=1 Tax=Frankia sp. BCU110501 RepID=UPI000376F87F rbh
helix-turn-helix domain-containing protein rbh
Helix-turn-helix domain protein {ECO:0000313|EMBL:ABW13178.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
SCNpilot_cont_500_bf_scaffold_2635_8
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6696..7379)
DNA (684bp) protein (228aa)
TetR family transcriptional regulator n=1 Tax=Agromyces italicus RepID=UPI0003B394B3
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KCB36429.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
SCNpilot_cont_500_bf_scaffold_2635_9

Not on your lists

7438..7911
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=uncultured microorganism RepID=E0X6Q6_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ACY25461.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2635_10
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7908..8216
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI0003792291
phospholipase/carboxylesterase
Phospholipase/carboxylesterase {ECO:0000313|EMBL:ADB39724.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2635_11
unknown

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8281..8547
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2635_12
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8829..9224)
DNA (396bp) protein (132aa)
family 2 glycosyl transferase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE02B
Uncharacterized protein {ECO:0000313|EMBL:EGW50582.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
glycosyl transferase family 2
SCNpilot_cont_500_bf_scaffold_2635_13
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9956..10495
DNA (540bp) protein (180aa)
ChrB domain-containing protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237AD00
PaaX-like protein
PaaX-like protein {ECO:0000313|EMBL:AFM17022.1}; TaxID=710421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
SCNpilot_cont_500_bf_scaffold_2635_14
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10527..11138
DNA (612bp) protein (204aa)
undecaprenyl-diphosphatase (EC:3.6.1.27)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00037EE995
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:AIJ23942.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
SCNpilot_cont_500_bf_scaffold_2635_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11135..11764
DNA (630bp) protein (210aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJY5_PSEUX
phosphoesterase PA-phosphatase-like protein
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:AEA27010.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2635_16
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11761..12960
DNA (1200bp) protein (400aa)
MFS transporter n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036BB81B rbh
Predicted protein {ECO:0000313|EMBL:EFL07287.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
major facilitator superfamily protein
Displaying 16 items

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