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SCNpilot_cont_500_bf_scaffold_2734

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2734_1
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..1660)
DNA (1659bp) protein (553aa)
Choline dehydrogenase {ECO:0000256|RuleBase:RU003969}; EC=1.1.99.1 {ECO:0000256|RuleBase:RU003969};; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
choline dehydrogenase n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003783E93 rbh
betA; choline dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_2734_2
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1841..3301
DNA (1461bp) protein (487aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AMH8_IGNAJ
Dolichyl-phosphate-mannose-protein mannosyltransferase
Dolichyl-phosphate-mannose-protein mannosyltransferase {ECO:0000313|EMBL:AFH50185.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
SCNpilot_cont_500_bf_scaffold_2734_3
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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3346..4803
DNA (1458bp) protein (486aa)
Polysaccharide biosynthesis protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S602_GEOOG
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ADB73219.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_500_bf_scaffold_2734_4
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4823..5953
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000361ACF3
Glycosyl transferase family 2 {ECO:0000313|EMBL:KJK47519.1}; TaxID=1609137 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
glycosyl transferase family protein
SCNpilot_cont_500_bf_scaffold_2734_5
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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5950..7236
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00038159E4 rbh
glycosyl transferase rbh
Putative glycosyltransferase {ECO:0000313|EMBL:ETA02186.1}; TaxID=1352929 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
SCNpilot_cont_500_bf_scaffold_2734_6
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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7257..7472
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y8D9_THEBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG89875.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
SCNpilot_cont_500_bf_scaffold_2734_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7541..8671)
DNA (1131bp) protein (377aa)
Oxidoreductase domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSQ0_PSEUX rbh
oxidoreductase domain-containing protein rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:AEA24122.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2734_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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8827..9420
DNA (594bp) protein (198aa)
HNH endonuclease n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR18_PSEUX rbh
HNH endonuclease rbh
HNH endonuclease {ECO:0000313|EMBL:AEA24076.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2734_9
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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9622..11481
DNA (1860bp) protein (620aa)
putative xyloglucan glycosyltransferase 9 (EC:2.4.1.-) rbh
Putative xyloglucan glycosyltransferase 9 {ECO:0000313|EMBL:AEV84147.1}; EC=2.4.1.- {ECO:0000313|EMBL:AEV84147.1};; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037D0CD3 rbh
SCNpilot_cont_500_bf_scaffold_2734_10
unknown

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comp(11924..12196)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2734_11
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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12829..13341
DNA (513bp) protein (171aa)
Putative secreted protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JNQ9_STREN
Galactose oxidase {ECO:0000313|EMBL:KJK58985.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
secreted protein
SCNpilot_cont_500_bf_scaffold_2734_12
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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13361..14323
DNA (963bp) protein (321aa)
Glucanase {ECO:0000256|RuleBase:RU361186}; EC=3.2.1.- {ECO:0000256|RuleBase:RU361186};; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
putative secreted endoglucanase (EC:3.2.1.4)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000375DC63
Displaying 12 items

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