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SCNpilot_cont_500_bf_scaffold_2771

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2771_1
unknown

Not on your lists

698..1009
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2771_2
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

991..5913
DNA (4923bp) protein (1641aa)
hypothetical protein, partial n=1 Tax=Salinispora arenicola RepID=UPI00036F440F rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU02815.1}; TaxID=1133849 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
SCNpilot_cont_500_bf_scaffold_2771_3
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6412..7599)
DNA (1188bp) protein (396aa)
Site-specific recombinase XerC n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X3S5_9PSEU rbh
Site-specific recombinase XerC {ECO:0000313|EMBL:EHR52143.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
Integrase family protein rbh
SCNpilot_cont_500_bf_scaffold_2771_4
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7599..7796)
DNA (198bp) protein (66aa)
excisionase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626A76
Predicted protein {ECO:0000313|EMBL:EFL04433.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
MerR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2771_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7809..9482)
DNA (1674bp) protein (558aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT7_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA27662.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2771_6
unknown

Not on your lists

comp(9479..9775)
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2771_7
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9772..11352)
DNA (1581bp) protein (527aa)
DNA segregation ATPase FtsK/SpoIIIE n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2YWP0_9PSEU rbh
DNA segregation ATPase FtsK/SpoIIIE {ECO:0000313|EMBL:EME52754.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family rbh
SCNpilot_cont_500_bf_scaffold_2771_8
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11352..11615)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Salinispora arenicola RepID=UPI0003820694
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL48862.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
SCNpilot_cont_500_bf_scaffold_2771_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11672..11962)
DNA (291bp) protein (97aa)
Transcriptional regulator WhiB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT4_PSEUX
transcription factor WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2771_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11959..12336)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT3_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27658.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2771_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12333..12773)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT2_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27657.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2771_12
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12946..13716
DNA (771bp) protein (257aa)
Putative regulatory protein KorSA, GntR-family transcriptional regulator n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2QBZ9_9PSEU rbh
Putative regulatory protein KorSA, GntR-family transcriptional regulator {ECO:0000313|EMBL:EMD23622.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
GntR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_2771_13
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13728..14387
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI00037E6447 rbh
Uncharacterized protein {ECO:0000313|EMBL:EMD23621.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2771_14
unknown

Not on your lists

comp(14429..15199)
DNA (771bp) protein (257aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2771_15
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15316..15960)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Microcystis aeruginosa PCC 9809 RepID=I4HPY8_MICAE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAG02185.1}; TaxID=449447 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa (strain NIES-843).;"
SCNpilot_cont_500_bf_scaffold_2771_16
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(15944..16774)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U7M8_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY91112.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
SCNpilot_cont_500_bf_scaffold_2771_17
unknown

Not on your lists

comp(17102..17380)
DNA (279bp) protein (93aa)

This feature has no annotations

Displaying 17 items

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