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SCNpilot_cont_500_bf_scaffold_2833

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2833_1
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1185..1454
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036E24C8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK34526.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
SCNpilot_cont_500_bf_scaffold_2833_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1657..2019
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM98_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23011.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2833_3
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2101..2382
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8KZI7_FRASN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW15967.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
SCNpilot_cont_500_bf_scaffold_2833_4
unknown

Not on your lists

2793..3299
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2833_5
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3452..4624)
DNA (1173bp) protein (391aa)
serine protease n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036710B4 rbh
Serine protease {ECO:0000313|EMBL:AIJ24322.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
serine protease rbh
SCNpilot_cont_500_bf_scaffold_2833_6
unknown

Not on your lists

comp(4727..4978)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2833_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5043..5816)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJT9_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA26964.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2833_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5906..6541
DNA (636bp) protein (212aa)
SNARE associated Golgi protein-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL88_PSEUX rbh
hypothetical protein; K03975 membrane-associated protein rbh
SNARE associated Golgi protein-like protein {ECO:0000313|EMBL:AEA25017.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2833_9
unknown

Not on your lists

6698..6892
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2833_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6889..7602
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CU04_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23412.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2833_11
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7605..9452)
DNA (1848bp) protein (616aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BFK3_STRRD rbh
sodium/proton antiporter rbh
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_500_bf_scaffold_2833_12
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

9551..10795
DNA (1245bp) protein (415aa)
Peptidase M23 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EIL1_9CHLR rbh
Peptidase M23 {ECO:0000313|EMBL:CCF84523.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
Peptidase M23 rbh
SCNpilot_cont_500_bf_scaffold_2833_13
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10819..11478)
DNA (660bp) protein (220aa)
ribulose-5-phosphate 4-epimerase-like epimerase or aldolase (EC:4.1.2.17)
L-fuculose-phosphate aldolase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WSJ0_9MICO
L-fuculose-phosphate aldolase {ECO:0000313|EMBL:GAB95077.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
SCNpilot_cont_500_bf_scaffold_2833_14
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11475..11801)
DNA (327bp) protein (109aa)
Serine/threonine protein kinase n=2 Tax=Saccharopolyspora erythraea RepID=T2S3G9_SACER
anti-sigma regulatory factor,serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:EQD86890.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
SCNpilot_cont_500_bf_scaffold_2833_15
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12081..12446)
DNA (366bp) protein (122aa)
Ribosome-associated heat shock protein Hsp15 n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2Z5Z4_9PSEU
Ribosome-associated heat shock protein {ECO:0000313|EMBL:EWC58655.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2833_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12490..14439)
DNA (1950bp) protein (650aa)
4-alpha-glucanotransferase; K00705 4-alpha-glucanotransferase [EC:2.4.1.25] rbh
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
4-alpha-glucanotransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQL6_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_2833_17
unknown

Not on your lists

14537..14839
DNA (303bp) protein (101aa)

This feature has no annotations

Displaying 17 items

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