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SCNpilot_cont_500_bf_scaffold_221

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_221_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..138
DNA (138bp) protein (46aa)
Cytochrome c oxidase, subunit I n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUA3_PSEUX
cytochrome c oxidase subunit I
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:AEA23734.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_221_2
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

521..1006
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Streptomyces sp. PsTaAH-124 RepID=UPI00036ECA02
Uncharacterized protein {ECO:0000313|EMBL:EWS99731.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_221_3
unknown

Not on your lists

comp(1071..1325)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_221_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1665..3581
DNA (1917bp) protein (639aa)
Cl-channel voltage-gated family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN94_PSEUX rbh
Cl-channel voltage-gated family protein rbh
Cl-channel voltage-gated family protein {ECO:0000313|EMBL:AEA27118.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_221_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3553..4008)
DNA (456bp) protein (152aa)
Transcriptional regulator, MarR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN93_PSEUX
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEA27117.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_221_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4446..5126)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00035CCB32
hypothetical protein; K07034
Uncharacterized protein {ECO:0000313|EMBL:AEA23659.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_221_7
unknown

Not on your lists

5570..5746
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_221_8
unknown

Not on your lists

6033..6383
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_221_9
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6374..7294
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5WWD0_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHR49412.1}; Flags: Precursor;; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_221_10
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7242..8540
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B2X6_FRADG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH08959.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
SCNpilot_cont_500_bf_scaffold_221_11
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8948..9322
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI000381ACA5
Uncharacterized protein {ECO:0000313|EMBL:CDO23732.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_221_12
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9457..9789
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Rhodococcus RepID=C1BDC5_RHOOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH55869.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
SCNpilot_cont_500_bf_scaffold_221_13
Rhodococcus sp. AW25M09, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10385..12094)
DNA (1710bp) protein (570aa)
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DL97_9NOCA rbh
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein {ECO:0000313|EMBL:CCQ17447.1}; TaxID=1268303 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AW25M09.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein; K07077 rbh
SCNpilot_cont_500_bf_scaffold_221_14
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12313..13581)
DNA (1269bp) protein (423aa)
Formyl-CoA transferase {ECO:0000313|EMBL:EHB58754.1}; EC=2.8.3.16 {ECO:0000313|EMBL:EHB58754.1};; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
Formyl-CoA transferase n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4HQD2_MYCRH rbh
L-carnitine dehydratase/bile acid-inducible protein F rbh
SCNpilot_cont_500_bf_scaffold_221_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13927..14610)
DNA (684bp) protein (228aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEA23697.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEA23697.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQZ8_PSEUX rbh
3-oxoacyl-ACP reductase rbh
SCNpilot_cont_500_bf_scaffold_221_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14607..15077)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSJ8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23708.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_221_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15077..16096)
DNA (1020bp) protein (340aa)
Luciferase-like, subgroup n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSJ9_PSEUX rbh
luciferase-like protein rbh
Luciferase-like, subgroup {ECO:0000313|EMBL:AEA23709.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_221_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16093..17097)
DNA (1005bp) protein (335aa)
aminocarboxymuconate-semialdehyde decarboxylase; K03392 aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45] rbh
Aminocarboxymuconate-semialdehyde decarboxylase {ECO:0000313|EMBL:AEA23721.1}; EC=4.1.1.45 {ECO:0000313|EMBL:AEA23721.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Aminocarboxymuconate-semialdehyde decarboxylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSL1_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_221_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17090..18433)
DNA (1344bp) protein (448aa)
Amidohydrolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSL2_PSEUX rbh
amidohydrolase rbh
Amidohydrolase {ECO:0000313|EMBL:AEA23722.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_221_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18520..19521)
DNA (1002bp) protein (334aa)
L-iditol 2-dehydrogenase {ECO:0000313|EMBL:AEA24797.1}; EC=1.1.1.14 {ECO:0000313|EMBL:AEA24797.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
L-iditol 2-dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ93_PSEUX rbh
L-iditol 2-dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_221_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19521..20465)
DNA (945bp) protein (315aa)
2-dehydropantoate 2-reductase; K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169] rbh
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
2-dehydropantoate 2-reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ95_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_221_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20614..21384
DNA (771bp) protein (257aa)
class II aldolase/adducin family protein; K01628 L-fuculose-phosphate aldolase [EC:4.1.2.17] rbh
Class II aldolase/adducin family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ96_PSEUX rbh
Class II aldolase/adducin family protein {ECO:0000313|EMBL:AEA24800.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_221_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21381..22574
DNA (1194bp) protein (398aa)
(S)-2-hydroxy-acid oxidase; K00101 L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] rbh
(S)-2-hydroxy-acid oxidase {ECO:0000313|EMBL:AEA24801.1}; EC=1.1.3.15 {ECO:0000313|EMBL:AEA24801.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
(S)-2-hydroxy-acid oxidase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ97_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_221_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22885..23853
DNA (969bp) protein (323aa)
Extracellular ligand-binding receptor n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ98_PSEUX rbh
ABC transporter substrate-binding protein rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AEA24802.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_221_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23873..24736
DNA (864bp) protein (288aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ99_PSEUX rbh
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEA24803.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_221_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24729..25811
DNA (1083bp) protein (361aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZX1_PSEUX rbh
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEA24804.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_221_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25808..26629
DNA (822bp) protein (274aa)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:AEA24805.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AEA24805.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Monosaccharide-transporting ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZX2_PSEUX rbh
monosaccharide-transporting ATPase rbh
SCNpilot_cont_500_bf_scaffold_221_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26613..27317
DNA (705bp) protein (235aa)
Fe(3+)-transporting ATPase {ECO:0000313|EMBL:AEA24806.1}; EC=3.6.3.30 {ECO:0000313|EMBL:AEA24806.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Fe(3+)-transporting ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZX3_PSEUX rbh
Fe(3+)-transporting ATPase rbh
SCNpilot_cont_500_bf_scaffold_221_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27317..27862
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZX4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24807.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_221_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27846..28601)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037DE516
xylose isomerase domain-containing protein
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AEA24798.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Displaying items 1-30 of 110 in total

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