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SCNpilot_cont_500_bf_scaffold_733

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_733_1
unknown

Not on your lists

2307..3167
DNA (861bp) protein (287aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_733_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3400..3969)
DNA (570bp) protein (190aa)
Transposase IS111A/IS1328/IS1533 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXC1_PSEUX
transposase IS111A/IS1328/IS1533
Transposase IS111A/IS1328/IS1533 {ECO:0000313|EMBL:AEA26495.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_733_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4309..4509
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXC6_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26500.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_733_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4535..4948
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXC5_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26499.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_733_5
unknown

Not on your lists

4966..5193
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_733_6
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5190..5849)
DNA (660bp) protein (220aa)
TetR family transcriptional regulator n=1 Tax=Rhodococcus opacus M213 RepID=K8XHR0_RHOOP rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:EKT76635.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
TetR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_733_7
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5976..6893
DNA (918bp) protein (306aa)
Alcohol dehydrogenase zinc-binding domain-containing protein n=1 Tax=Rhodococcus opacus M213 RepID=K8X772_RHOOP rbh
Alcohol dehydrogenase zinc-binding domain-containing protein {ECO:0000313|EMBL:EKT76636.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
alcohol dehydrogenase zinc-binding domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_733_8
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6749..7444)
DNA (696bp) protein (232aa)
Uncharacterized protein {ECO:0000313|EMBL:ETZ96317.1}; TaxID=1299327 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 732.;"
SCNpilot_cont_500_bf_scaffold_733_9
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7577..7918
DNA (342bp) protein (114aa)
RNA-directed DNA polymerase (EC:2.7.7.49)
reverse transcriptase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237A822
RNA-directed DNA polymerase {ECO:0000313|EMBL:EGX55280.1}; TaxID=700597 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zinciresistens K42.;"
SCNpilot_cont_500_bf_scaffold_733_10
Mycobacterium intracellulare, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7945..9729)
DNA (1785bp) protein (595aa)
Transposase n=2 Tax=Mycobacterium avium complex (MAC) RepID=J9WGR0_9MYCO rbh
transposase rbh
Integrase core domain protein {ECO:0000313|EMBL:ETZ27686.1}; TaxID=1335421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium intracellulare MIN_052511_1280.;"
SCNpilot_cont_500_bf_scaffold_733_11
unknown

Not on your lists

10078..10401
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_733_12
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10401..10901
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KUI5_STRRC
Uncharacterized protein {ECO:0000313|EMBL:EST35086.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
Protein chrB
SCNpilot_cont_500_bf_scaffold_733_13
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10987..11328
DNA (342bp) protein (114aa)
Chromate resistance protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KSH8_STRRC
Chromate resistance protein {ECO:0000313|EMBL:EST35087.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
Protein chrB
SCNpilot_cont_500_bf_scaffold_733_14
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11369..11716)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KST2_STRRC
Uncharacterized protein {ECO:0000313|EMBL:EST35088.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
SCNpilot_cont_500_bf_scaffold_733_15
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11735..12577
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. AA4 RepID=D9UVP7_9ACTO rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EFL08367.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_733_16
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13147..13539)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI00036019BF
Uncharacterized protein {ECO:0000313|EMBL:EMF20451.1}; TaxID=1284664 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gancidicus BKS 13-15.;"
SC6D11.22c; hypothetical protein
SCNpilot_cont_500_bf_scaffold_733_17
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13579..13992)
DNA (414bp) protein (138aa)
Putative membrane protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JJ09_STREN
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCB72055.1}; Uncharacterized protein {ECO:0000313|EMBL:AEW98898.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
SCNpilot_cont_500_bf_scaffold_733_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13989..15167)
DNA (1179bp) protein (393aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW47_PSEUX rbh
major facilitator superfamily protein; K02575 MFS transporter, NNP family, nitrate/nitrite transporter rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA26461.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_733_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15437..19144
DNA (3708bp) protein (1236aa)
Nitrate reductase, alpha subunit {ECO:0000313|EMBL:AEA26462.1}; EC=1.7.99.4 {ECO:0000313|EMBL:AEA26462.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
nitrate reductase subunit alpha; K00370 nitrate reductase 1, alpha subunit [EC:1.7.99.4] rbh
Nitrate reductase, alpha subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW48_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_733_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19144..20805
DNA (1662bp) protein (554aa)
nitrate reductase subunit beta; K00371 nitrate reductase 1, beta subunit [EC:1.7.99.4] rbh
Nitrate reductase, beta subunit {ECO:0000313|EMBL:AEA26463.1}; EC=1.7.99.4 {ECO:0000313|EMBL:AEA26463.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Nitrate reductase, beta subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW49_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_733_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20802..21446
DNA (645bp) protein (215aa)
Nitrate reductase molybdenum cofactor assembly chaperone n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW50_PSEUX
nitrate reductase molybdenum cofactor assembly chaperone; K00373 nitrate reductase 1, delta subunit
Nitrate reductase molybdenum cofactor assembly chaperone {ECO:0000313|EMBL:AEA26464.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_733_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21443..22171
DNA (729bp) protein (243aa)
respiratory nitrate reductase subunit gamma; K00374 nitrate reductase 1, gamma subunit [EC:1.7.99.4] rbh
Respiratory nitrate reductase, gamma subunit {ECO:0000313|EMBL:AEA26465.1}; EC=1.7.99.4 {ECO:0000313|EMBL:AEA26465.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Respiratory nitrate reductase, gamma subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW51_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_733_23
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22168..22521
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Streptomyces coelicoflavus ZG0656 RepID=H1QGS4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EHN76337.1}; TaxID=1120227 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;"
SCD31.14; hypothetical protein
SCNpilot_cont_500_bf_scaffold_733_24
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22587..23075)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037EE5D5
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein {ECO:0000313|EMBL:AIJ22818.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
SCNpilot_cont_500_bf_scaffold_733_25
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23223..23888)
DNA (666bp) protein (222aa)
putative methyltransferase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEEBB
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EXG82289.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
methyltransferase
SCNpilot_cont_500_bf_scaffold_733_26
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23914..25365)
DNA (1452bp) protein (484aa)
Putative integral membrane transport protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RHZ2_CLAMS
transport protein
Putative integral membrane transport protein {ECO:0000313|EMBL:CAQ01418.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
SCNpilot_cont_500_bf_scaffold_733_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25358..26323)
DNA (966bp) protein (322aa)
Helix-turn-helix type 11 domain-containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR46_PSEUX rbh
helix-turn-helix type 11 domain-containing protein rbh
Helix-turn-helix type 11 domain-containing protein {ECO:0000313|EMBL:AEA24483.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_733_28
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26387..26785
DNA (399bp) protein (133aa)
Glyoxalase family protein n=4 Tax=Mycobacterium avium complex (MAC) RepID=H8IVI6_MYCIA
Glyoxalase {ECO:0000313|EMBL:CQD19758.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;"
glyoxalase family protein
SCNpilot_cont_500_bf_scaffold_733_29
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26788..27123)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI0003496373
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABS01827.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
SCNpilot_cont_500_bf_scaffold_733_30
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27153..28010)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI000360F94A rbh
Uncharacterized protein {ECO:0000313|EMBL:EWM18891.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
Displaying items 1-30 of 70 in total

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