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SCNpilot_cont_500_bf_scaffold_928

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_928_1
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

128..694
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037B9424
Uncharacterized protein {ECO:0000313|EMBL:EWT00502.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_928_2
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

733..1248
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Rhodococcus opacus RepID=UPI00029CCD13 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHK35129.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_928_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1263..1673)
DNA (411bp) protein (137aa)
CBS domain containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CX10_PSEUX
CBS domain-containing protein
CBS domain containing protein {ECO:0000313|EMBL:AEA24641.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_928_4
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1670..5065)
DNA (3396bp) protein (1132aa)
ABC transporter ATPase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627926 rbh
ABC transporter ATPase {ECO:0000313|EMBL:KDN18750.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
fused ATPase and permease components of ABC transport system rbh
SCNpilot_cont_500_bf_scaffold_928_5
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5062..6102)
DNA (1041bp) protein (347aa)
Cytochrome d ubiquinol oxidase subunit II {ECO:0000313|EMBL:CEL13293.1}; EC=1.10.3.- {ECO:0000313|EMBL:CEL13293.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
cytochrome C oxidase assembly protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627927 rbh
cydB; cytochrome bd-I oxidase subunit II rbh
SCNpilot_cont_500_bf_scaffold_928_6
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6116..7543)
DNA (1428bp) protein (476aa)
cytochrome bd-I oxidase subunit I; K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-] rbh
cytochrome BD ubiquinol oxidase subunit I n=1 Tax=Amycolatopsis balhimycina RepID=UPI00035C7124 rbh
Cytochrome bd-I oxidase subunit I {ECO:0000313|EMBL:EOD70261.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
SCNpilot_cont_500_bf_scaffold_928_7
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7828..9525
DNA (1698bp) protein (566aa)
GAF sensor signal transduction histidine kinase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDFCF rbh
Histidine kinase {ECO:0000313|EMBL:KFZ81558.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
GAF sensor signal transduction histidine kinase rbh
SCNpilot_cont_500_bf_scaffold_928_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9533..10495)
DNA (963bp) protein (321aa)
Nitroreductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKK5_PSEUX rbh
nitroreductase rbh
Nitroreductase {ECO:0000313|EMBL:AEA22975.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_928_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10595..11245)
DNA (651bp) protein (217aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKL1_PSEUX rbh
LuxR family transcriptional regulator rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEA22981.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_928_10
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11403..12392
DNA (990bp) protein (330aa)
Uncharacterized protein n=2 Tax=Saccharopolyspora erythraea RepID=A4FCF0_SACEN
hypothetical protein
Nitroreductase {ECO:0000313|EMBL:EQD83897.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
SCNpilot_cont_500_bf_scaffold_928_11
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12403..13146)
DNA (744bp) protein (248aa)
Putative ribosomal subunit interface protein n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5PDD1_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:AHH97526.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_928_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13381..14364)
DNA (984bp) protein (328aa)
Nitroreductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CX09_PSEUX
nitroreductase
Nitroreductase {ECO:0000313|EMBL:AEA24640.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_928_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14361..15386)
DNA (1026bp) protein (342aa)
Nitroreductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKK7_PSEUX rbh
nitroreductase rbh
Nitroreductase {ECO:0000313|EMBL:AEA22977.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_928_14
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15702..16394
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237ADB7 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EDY58013.2}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_928_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16406..18082)
DNA (1677bp) protein (559aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWU8_PSEUX
cell envelope-related transcriptional attenuator
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:AEA23850.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_928_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18366..19607
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLX7_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA22325.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_928_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19607..20341
DNA (735bp) protein (245aa)
CobB/CobQ domain protein glutamine amidotransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLX8_PSEUX
CobB/CobQ domain-containing protein glutamine amidotransferase; K07009
CobB/CobQ domain protein glutamine amidotransferase {ECO:0000313|EMBL:AEA22326.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_928_18
unknown

Not on your lists

20390..20575
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_928_19
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(20593..21000)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00035EBCFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJF16234.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
SCNpilot_cont_500_bf_scaffold_928_20
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21638..22522)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00035D5878 rbh
Acid phosphatase {ECO:0000313|EMBL:EWT04668.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
phosphoesterase rbh
SCNpilot_cont_500_bf_scaffold_928_21
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22611..23219
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XFQ5_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV78016.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_500_bf_scaffold_928_22
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23204..24292
DNA (1089bp) protein (363aa)
beta-lactamase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3C0C4 rbh
beta-lactamase; K06897 rbh
Beta-lactamase domain protein {ECO:0000313|EMBL:ADP84599.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_500_bf_scaffold_928_23
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24306..24668
DNA (363bp) protein (121aa)
extradiol dioxygenase n=1 Tax=Streptomyces vitaminophilus RepID=UPI00037C4526
Uncharacterized protein {ECO:0000313|EMBL:AIS02315.1}; TaxID=1907 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
SC5G9.13c; hypothetical protein
SCNpilot_cont_500_bf_scaffold_928_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24665..24946)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ41_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27237.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_928_25
Karlodinium veneficum, Karlodinium, Gymnodiniales, Dinophyceae, Eukaryota

Not on your lists

24991..25347
DNA (357bp) protein (119aa)
14-3-3-like protein n=1 Tax=Karlodinium veneficum RepID=A7YXW5_KARVE
14-3-3-like protein {ECO:0000313|EMBL:ABV22244.1}; TaxID=407301 species="Eukaryota; Alveolata; Dinophyceae; Gymnodiniales; Kareniaceae; Karlodinium.;" source="Karlodinium veneficum (Dinoflagellate) (Karlodinium micrum).;"
14-3-3 protein ; K06630 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein
SCNpilot_cont_500_bf_scaffold_928_26
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25953..26780)
DNA (828bp) protein (276aa)
Aliphatic amidase AmiE {ECO:0000313|EMBL:EWC58843.1}; EC=3.5.1.4 {ECO:0000313|EMBL:EWC58843.1};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
apolipoprotein N- acyltransferase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026268F8 rbh
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_928_27
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26871..27383)
DNA (513bp) protein (171aa)
DsrE family protein n=1 Tax=Actinoplanes globisporus RepID=UPI00038073E0 rbh
DsrE family protein {ECO:0000313|EMBL:AIJ23735.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_928_28
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27412..28791)
DNA (1380bp) protein (460aa)
FAD-dependent oxidoreductase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026268FD rbh
Monooxygenase {ECO:0000313|EMBL:AIJ23733.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_928_29
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28951..29742)
DNA (792bp) protein (264aa)
Methyltransferase-UbiE family protein n=1 Tax=Streptomyces sp. AA4 RepID=D9UVB3_9ACTO rbh
Methyltransferase-UbiE family protein {ECO:0000313|EMBL:EFL06129.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
type 11 methyltransferase rbh
SCNpilot_cont_500_bf_scaffold_928_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29756..30160)
DNA (405bp) protein (135aa)
NLP/P60 protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNL3_PSEUX
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:AEA28311.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Displaying items 1-30 of 38 in total

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