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SCNpilot_cont_500_bf_scaffold_941

Search features with annotation key words

Displaying items 31-59 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_941_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29599..30120)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYN5_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26605.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_941_31
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30137..31999)
DNA (1863bp) protein (621aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
DNA primase; K02316 DNA primase [EC:2.7.7.-] rbh
DNA primase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYN6_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_941_32
unknown

Not on your lists

comp(32010..32195)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_941_33
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32298..33266)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE753 rbh
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:BAL97302.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
SCNpilot_cont_500_bf_scaffold_941_34
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33308..34165
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RAT3_9BIFI rbh
Excalibur domain containing protein {ECO:0000313|EMBL:KFI48835.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_941_35
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34218..34637
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037FD425
MerR family transcriptional regulator {ECO:0000313|EMBL:KJR06280.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
MerR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_941_36
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34659..35240)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2XUX2_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EME53015.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_941_37
Streptomyces sp. Mg1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35326..35751
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036CA648
GCN5-like N-acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:EDX23078.1}; TaxID=465541 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
SCNpilot_cont_500_bf_scaffold_941_38
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35705..36934)
DNA (1230bp) protein (410aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein; K01129 dGTPase [EC:3.1.5.1] rbh
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYP3_PSEUX rbh
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_941_39
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36931..37620)
DNA (690bp) protein (230aa)
hypothetical protein, partial n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF29E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26614.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_941_40
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37617..38639)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYP5_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA26615.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_941_41
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38986..40317
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYQ2_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA26622.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_941_42
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40314..41309
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYQ3_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA26623.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_941_43
unknown

Not on your lists

41392..41592
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEF12
SCNpilot_cont_500_bf_scaffold_941_44
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41593..42372
DNA (780bp) protein (260aa)
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:KFF98489.1}; EC=1.1.1.69 {ECO:0000313|EMBL:KFF98489.1};; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
gluconate dehydrogenase; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] rbh
Gluconate 5-dehydrogenase n=1 Tax=Streptomyces sp. e14 RepID=D6K8Q1_9ACTO rbh
SCNpilot_cont_500_bf_scaffold_941_45
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(42374..43771)
DNA (1398bp) protein (466aa)
glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase [EC:6.1.1.14] rbh
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Glycine--tRNA ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYQ4_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_941_46
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43830..44897)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0B0_PSEUX
hypothetical protein; K09799 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25766.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_941_47
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44914..45234)
DNA (321bp) protein (107aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYQ7_PSEUX
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AEA26627.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_941_48
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45290..45646
DNA (357bp) protein (119aa)
Regulatory protein ArsR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYQ8_PSEUX
regulatory protein ArsR; K03892 ArsR family transcriptional regulator
Regulatory protein ArsR {ECO:0000313|EMBL:AEA26628.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_941_49
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45643..46041
DNA (399bp) protein (133aa)
Fur family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFECAC
Fur family ferric uptake regulator; K03711 Fur family transcriptional regulator, ferric uptake regulator
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:AEA26629.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_941_50
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46105..46740
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFECAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26633.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_941_51
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46784..46999)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FEE2_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB46208.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
SCNpilot_cont_500_bf_scaffold_941_52
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47014..47403)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYR1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26631.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_941_53
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47400..48185)
DNA (786bp) protein (262aa)
UDP pyrophosphate synthase; K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] rbh
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Isoprenyl transferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYR0_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_941_54
Streptomyces sp. SirexAA-E, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48196..49338)
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNT372 RepID=UPI0003823601 rbh
aromatic amino acid beta-eliminating lyase/threonine aldolase rbh
Aromatic amino acid beta-eliminating lyase/threonine aldolase {ECO:0000313|EMBL:AEN10708.1}; TaxID=862751 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SirexAA-E / ActE).;"
SCNpilot_cont_500_bf_scaffold_941_55
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49349..50119)
DNA (771bp) protein (257aa)
DNA repair protein RecO n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYR4_PSEUX rbh
DNA repair protein recO; K03584 DNA repair protein RecO (recombination protein O) rbh
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_941_56
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50181..50837
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYR6_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26636.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_941_57
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50839..51129
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYR5_PSEUX
hypothetical protein; K07226 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26635.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_941_58
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51123..51590
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00035C6884
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37521.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Displaying items 31-59 of 59 in total

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