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SCNpilot_cont_500_bf_scaffold_941

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_941_1
unknown

Not on your lists

comp(1..102)
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_941_2
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(139..897)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Streptomycetaceae bacterium MP113-05 RepID=V6L089_9ACTO
Integrase core domain protein {ECO:0000313|EMBL:EUA31624.1}; TaxID=1299329 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium subsp. avium 2285 (S).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_941_3
unknown

Not on your lists

2050..2154
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_941_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2299..3102)
DNA (804bp) protein (268aa)
Methyltransferase type 11 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMT7_PSEUX rbh
type 11 methyltransferase rbh
Methyltransferase type 11 {ECO:0000313|EMBL:AEA25036.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_941_5
unknown

Not on your lists

3609..3854
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_941_6
unknown

Not on your lists

3851..4054
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_941_trna_1
unknown

Not on your lists

comp(4199..4270)
DNA (72bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_941_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4419..4610
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYN3_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26603.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_941_8
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5464..6480
DNA (1017bp) protein (339aa)
Cation efflux system protein n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CBJ5_STRBB rbh
cation efflux system protein; K03295 cation efflux system protein, CDF family rbh
Cation efflux system protein {ECO:0000313|EMBL:ADI12872.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
SCNpilot_cont_500_bf_scaffold_941_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6525..7412)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWI8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28680.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_941_10
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7536..9647)
DNA (2112bp) protein (704aa)
glycoside hydrolase clan GH-D; K07407 alpha-galactosidase [EC:3.2.1.22] rbh
Alpha-galactosidase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KZB9_9ACTO rbh
Alpha-galactosidase {ECO:0000313|EMBL:EWM18142.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
SCNpilot_cont_500_bf_scaffold_941_11
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9774..11129
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000376F343 rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:EWT02350.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_941_12
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11143..12099
DNA (957bp) protein (319aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KZC1_9ACTO rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCH16918.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
ABC transporter inner membrane protein; K02025 multiple sugar transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_941_13
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12096..12980
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000381743D rbh
ABC transporter permease {ECO:0000313|EMBL:EWT02348.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
ABC transporter inner membrane protein; K02026 multiple sugar transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_941_14
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12977..14953
DNA (1977bp) protein (659aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
beta-galactosidase (EC:3.2.1.23); K12308 beta-galactosidase [EC:3.2.1.23] rbh
Beta-galactosidase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KZC3_9ACTO rbh
SCNpilot_cont_500_bf_scaffold_941_15
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15193..15621
DNA (429bp) protein (143aa)
Transcriptional regulator, DeoR family n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4ESJ5_MODMB
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:CCH86358.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
SCNpilot_cont_500_bf_scaffold_941_16
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15731..16801
DNA (1071bp) protein (357aa)
galT; UTP-glucose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] rbh
Galactose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU000506}; EC=2.7.7.12 {ECO:0000256|RuleBase:RU000506};; TaxID=685727 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi (strain 103S) (Corynebacterium equi).;"
Galactose-1-phosphate uridylyltransferase n=1 Tax=Rhodococcus equi (strain 103S) RepID=E4W946_RHOE1 rbh
SCNpilot_cont_500_bf_scaffold_941_17
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16842..17954
DNA (1113bp) protein (371aa)
galactokinase; K00849 galactokinase [EC:2.7.1.6]
Galactokinase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H364_CELFA
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_500_bf_scaffold_941_18
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18229..19248
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7EWJ0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ELP63239.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_941_19
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19248..19844
DNA (597bp) protein (199aa)
FMN-binding negative transcriptional regulator n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K4Q6_SACES
Transcriptional regulator {ECO:0000313|EMBL:EWM13884.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
FMN-binding negative transcriptional regulator
SCNpilot_cont_500_bf_scaffold_941_20
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19856..20308
DNA (453bp) protein (151aa)
Glyoxalase n=1 Tax=Streptomycetaceae bacterium MP113-05 RepID=V6L3W1_9ACTO
Glyoxalase {ECO:0000313|EMBL:EST38938.1}; TaxID=1380770 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_500_bf_scaffold_941_21
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20575..21207
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037A385F
Methyltransferase type 11 {ECO:0000313|EMBL:CDR17583.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
type 12 methyltransferase
SCNpilot_cont_500_bf_scaffold_941_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21237..21719
DNA (483bp) protein (161aa)
Polyketide cyclase/dehydrase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT38_PSEUX
polyketide cyclase/dehydrase
Polyketide cyclase/dehydrase {ECO:0000313|EMBL:AEA26256.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_941_23
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21646..23055)
DNA (1410bp) protein (470aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
histidine kinase n=1 Tax=Amycolatopsis methanolica RepID=UPI00036B7945 rbh
two-component system sensor kinase rbh
SCNpilot_cont_500_bf_scaffold_941_24
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23064..24722)
DNA (1659bp) protein (553aa)
chemotaxis protein CheY n=1 Tax=Amycolatopsis methanolica RepID=UPI000374A553 rbh
Thioredoxin reductase {ECO:0000313|EMBL:AIJ24434.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
trxB; thioredoxin reductase (NADPH) rbh
SCNpilot_cont_500_bf_scaffold_941_25
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25151..25837
DNA (687bp) protein (229aa)
binding-protein-dependent transporter inner membrane component n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE030
binding-protein-dependent transport system inner membrane protein; K05846 osmoprotectant transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABV97515.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
SCNpilot_cont_500_bf_scaffold_941_26
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25830..26939
DNA (1110bp) protein (370aa)
glycine/betaine ABC transporter n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE031 rbh
Glycine betaine/carnitin ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJE81428.1}; TaxID=1888 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
glycine betaine/L-proline ABC transporter ATPase; K05847 osmoprotectant transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_941_27
Corynebacterium matruchotii, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26936..27724
DNA (789bp) protein (263aa)
quaternary amine ABC transporter permease n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE032
ABC transporter, permease protein {ECO:0000313|EMBL:EEG26355.1}; TaxID=566549 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium matruchotii ATCC 33806.;"
Putative ABC transporter permease
SCNpilot_cont_500_bf_scaffold_941_28
Rhodococcus sp. PML026, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27748..28722
DNA (975bp) protein (325aa)
glycine/betaine ABC transporter substrate-binding protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE033 rbh
Glycine betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJV02816.1}; TaxID=1356405 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. PML026.;"
ABC transporter substrate-binding protein; K05845 osmoprotectant transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_941_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28808..29572)
DNA (765bp) protein (255aa)
trans-aconitate 2-methyltransferase; K00598 trans-aconitate 2-methyltransferase [EC:2.1.1.144] rbh
Trans-aconitate 2-methyltransferase {ECO:0000313|EMBL:AEA26604.1}; EC=2.1.1.144 {ECO:0000313|EMBL:AEA26604.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Trans-aconitate 2-methyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYN4_PSEUX rbh
Displaying items 1-30 of 59 in total

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