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SCNpilot_cont_500_bf_scaffold_941_25

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 25151..25837

Top 3 Functional Annotations

Value Algorithm Source
binding-protein-dependent transporter inner membrane component n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE030 similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 226.0
  • Bit_score: 278
  • Evalue 7.20e-72
binding-protein-dependent transport system inner membrane protein; K05846 osmoprotectant transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 218.0
  • Bit_score: 191
  • Evalue 2.10e-46
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABV97515.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 218.0
  • Bit_score: 191
  • Evalue 9.50e-46

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Taxonomy

Salinispora arenicola → Salinispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGGGCGACATCCTCCAGTACCTCTCGACCAACGCGACCGACGTCCAGTTCTACGCGCAGACGCACTTCCTCCTCGTGCTCTACTCGGTGGCCATCGCCACCGTCATCGCGCTGGTGCTCGCGCTGGTGCTGCACACGAACCAGCTGACGCCGCCGTCGTGGTCCCGGACGGTGCGCGCGGGCTCGCAGGAGACCGCGCTGCTGATCGCGTCCGCGCTGCTGACCGTGCCGTCGCTCGCCCTGTTCGGGCTGCTGCAGCCGATCTTCGGGTTCGGCATCTCGCCGGCCATCGTCGGGCTGACGCTCTACGGGATCTACCCGGTGCTCCGCAACACCGTGGCCGGGCTGTCGTCGGTGGACCCCGCCGTGCTGGAGGCCGCCCGCGGGATCGGGATGGGCCCGATCCGGCGCATGGCGCGCGTGCAGCTCCCGCTGGCCTGGCCGGTGGTGCTCTCGGGGATCCGCGTCTCCGTGCTGATCATGGTCTCCATCGCCGCCGTCGGTGCCGTCGTGAGCGGGCTGGGCTTCGGCAAGCCCCTGCTGGACGGCCTCACGCGCCTCGGCGGAGCGGGCAGCTTCGCCCAGGTCGTCGTCGGCACGCTCGGGCCGCTGGTCATCGCCGCGGTCTTCGAGATCGCGTTCGTCATCATCAAACGCCTCACCACGCCGAGGGGGATCCGTGTCTGA
PROTEIN sequence
Length: 229
MGDILQYLSTNATDVQFYAQTHFLLVLYSVAIATVIALVLALVLHTNQLTPPSWSRTVRAGSQETALLIASALLTVPSLALFGLLQPIFGFGISPAIVGLTLYGIYPVLRNTVAGLSSVDPAVLEAARGIGMGPIRRMARVQLPLAWPVVLSGIRVSVLIMVSIAAVGAVVSGLGFGKPLLDGLTRLGGAGSFAQVVVGTLGPLVIAAVFEIAFVIIKRLTTPRGIRV*