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SCNpilot_cont_500_bf_scaffold_1144

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1144_1
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(218..1105)
DNA (888bp) protein (296aa)
Hydrolase, alpha/beta fold family n=2 Tax=Saccharopolyspora erythraea RepID=A4FJD5_SACEN rbh
alpha/beta hydrolase rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:EQD85365.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
SCNpilot_cont_500_bf_scaffold_1144_2
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1517..1819)
DNA (303bp) protein (101aa)
Muconolactone delta-isomerase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLI9_9CHLR
Muconolactone delta-isomerase {ECO:0000313|EMBL:AHY45825.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
putative translational initiation factor
SCNpilot_cont_500_bf_scaffold_1144_3
unknown

Not on your lists

2327..2545
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1144_4
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2464..3798)
DNA (1335bp) protein (445aa)
cyclohexanone monooxygenase (EC:1.14.13.22); K03379 cyclohexanone monooxygenase [EC:1.14.13.22]
Cyclohexanone monooxygenase n=1 Tax=Rhodococcus opacus M213 RepID=K8XKW0_RHOOP
Cyclohexanone monooxygenase {ECO:0000313|EMBL:EKT82268.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
SCNpilot_cont_500_bf_scaffold_1144_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3929..4726
DNA (798bp) protein (266aa)
Transposase IS4 family protein n=3 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4IYB1_9PSEU rbh
Uncharacterized protein {ECO:0000313|EMBL:EXG82288.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
response regulator receiver protein
SCNpilot_cont_500_bf_scaffold_1144_6
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4800..5045
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Frankia sp. QA3 RepID=I9A590_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EIV94596.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
SCNpilot_cont_500_bf_scaffold_1144_7
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5339..6310
DNA (972bp) protein (324aa)
Alpha/beta hydrolase fold n=2 Tax=Burkholderia cenocepacia RepID=A2VZQ5_9BURK
Hydrolase (HAD superfamily) {ECO:0000313|EMBL:ESS41723.1}; TaxID=1396830 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia KC-01.;"
alpha/beta hydrolase
SCNpilot_cont_500_bf_scaffold_1144_8

Not on your lists

6669..7013
DNA (345bp) protein (115aa)
Transposase IS4 family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6H7_PSEUX
Putative transposase for insertion sequence {ECO:0000313|EMBL:AHE14669.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transposase IS4 family protein
SCNpilot_cont_500_bf_scaffold_1144_9
unknown

Not on your lists

comp(7284..7559)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1144_10
unknown

Not on your lists

7737..8324
DNA (588bp) protein (196aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1144_11
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8461..9435)
DNA (975bp) protein (325aa)
Ca2+/Na+ antiporter n=1 Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BRN4_MYCCN rbh
LigA protein {ECO:0000313|EMBL:EWM10711.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
Ca2+/Na+ antiporter rbh
SCNpilot_cont_500_bf_scaffold_1144_12
unknown

Not on your lists

9974..10312
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1144_13
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10344..10814)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LXB4_METRJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB27235.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_cont_500_bf_scaffold_1144_14
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10897..11388
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Saccharopolyspora erythraea RepID=A4FHR0_SACEN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQD83113.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
SCNpilot_cont_500_bf_scaffold_1144_15
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11691..13730)
DNA (2040bp) protein (680aa)
Putative cation-transporting P-type ATPase n=1 Tax=Streptomyces collinus Tu 365 RepID=S5VRC0_STRCU rbh
Metal ABC transporter ATPase {ECO:0000313|EMBL:KJS57391.1}; TaxID=1615590 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp. indigoferus.;"
putative cation-transporting P-type ATPase rbh
SCNpilot_cont_500_bf_scaffold_1144_16
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13833..14180
DNA (348bp) protein (116aa)
ArsR family transcriptional regulator n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036D171E
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AEH11414.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
SCNpilot_cont_500_bf_scaffold_1144_17
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14453..17008)
DNA (2556bp) protein (852aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000378DA10 rbh
Membrane protein {ECO:0000313|EMBL:AJE39550.1}; TaxID=40318 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
ABC transporter permease rbh
SCNpilot_cont_500_bf_scaffold_1144_18
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17019..17819)
DNA (801bp) protein (267aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00037017C9 rbh
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ADI07458.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
SCNpilot_cont_500_bf_scaffold_1144_19
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17977..18903)
DNA (927bp) protein (309aa)
Peptidase M48, Ste24p n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2JAU2_FRASC
Peptidase M48 {ECO:0000313|EMBL:EWM10449.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
peptidase M48, Ste24p
SCNpilot_cont_500_bf_scaffold_1144_20
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18900..19292)
DNA (393bp) protein (131aa)
Transcriptional repressor, CopY family n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IV72_FRASU
CopY family transcriptional regulator; K07737 putative transcriptional regulator
Transcriptional repressor, CopY family {ECO:0000313|EMBL:ADP80092.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_500_bf_scaffold_1144_21
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19361..20551)
DNA (1191bp) protein (397aa)
MFS transporter n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036BB81B
Predicted protein {ECO:0000313|EMBL:EFL07287.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
major facilitator superfamily protein rbh
SCNpilot_cont_500_bf_scaffold_1144_22
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20548..21486)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0GW26_STRA9
Uncharacterized protein {ECO:0000313|EMBL:ETK37470.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
peptidase M48 Ste24p
SCNpilot_cont_500_bf_scaffold_1144_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21494..21946)
DNA (453bp) protein (151aa)
Transcriptional repressor, CopY family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJY7_PSEUX
CopY family transcriptional regulator
Transcriptional repressor, CopY family {ECO:0000313|EMBL:AEA27012.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1144_24
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22037..22759
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N5F3_KITSK
hypothetical protein; K03975 membrane-associated protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ26434.1}; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
SCNpilot_cont_500_bf_scaffold_1144_25
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22761..23714
DNA (954bp) protein (318aa)
Undecaprenyl-diphosphatase n=1 Tax=Nocardioides sp. CF8 RepID=R7XRT4_9ACTO
Undecaprenyl-diphosphatase {ECO:0000313|EMBL:EON22051.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
phosphoesterase PA-phosphatase-like protein
SCNpilot_cont_500_bf_scaffold_1144_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23711..24358
DNA (648bp) protein (216aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJY5_PSEUX rbh
phosphoesterase PA-phosphatase-like protein rbh
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:AEA27010.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1144_27
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24355..25284
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Arthrobacter sp. TB 23 RepID=UPI0002DBEDA7
Uncharacterized protein {ECO:0000313|EMBL:KIC65474.1}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
integral membrane protein
SCNpilot_cont_500_bf_scaffold_1144_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25281..26012
DNA (732bp) protein (244aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJY5_PSEUX
phosphoesterase PA-phosphatase-like protein
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:AEA27010.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1144_29
unknown

Not on your lists

26002..26517
DNA (516bp) protein (172aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1144_30
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26511..29078
DNA (2568bp) protein (856aa)
Uncharacterized protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6W9S5_ACTMD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU37292.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
Displaying items 1-30 of 43 in total

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