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SCNpilot_cont_500_bf_scaffold_1175

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1175_1
unknown

Not on your lists

3..119
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1175_2
unknown

Not on your lists

comp(165..842)
DNA (678bp) protein (226aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1175_3
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

969..1511
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034CAE92
Uncharacterized protein {ECO:0000313|EMBL:KJC56810.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1175_4
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1457..2344
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003663889 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC56810.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1175_5

Not on your lists

2341..2886
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000381A594
Marine sediment metagenome DNA, contig: S03H2_L00291 {ECO:0000313|EMBL:GAH35178.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Electron transport protein SCO1/SenC; K07152
SCNpilot_cont_500_bf_scaffold_1175_6
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2825..3148)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037BD953
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ADB76627.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_500_bf_scaffold_1175_7
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3328..3915)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Streptomyces sp. TOR3209 RepID=UPI0003048E80
Uncharacterized protein {ECO:0000313|EMBL:EHN73771.1}; TaxID=1120227 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;"
SCI7.09c; hypothetical protein
SCNpilot_cont_500_bf_scaffold_1175_8
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4117..5136)
DNA (1020bp) protein (340aa)
Acyltransferase 3 n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21EG5_SACD2
hypothetical protein
Acyltransferase 3 {ECO:0000313|EMBL:ABD82914.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024).;"
SCNpilot_cont_500_bf_scaffold_1175_9
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5275..5973
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037583D7 rbh
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADB73535.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_500_bf_scaffold_1175_10
unknown

Not on your lists

comp(5962..6183)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1175_11
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6183..7130)
DNA (948bp) protein (316aa)
universal stress protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDEC9
Universal stress protein {ECO:0000313|EMBL:AIJ23136.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
universal stress protein
SCNpilot_cont_500_bf_scaffold_1175_12
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7282..8298
DNA (1017bp) protein (339aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:AHH97001.1}; EC=1.2.1.12 {ECO:0000313|EMBL:AHH97001.1};; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI00037D6DAE rbh
gapA; glyceraldehyde-3-phosphate dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_1175_13
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8301..9962)
DNA (1662bp) protein (554aa)
UPI0003D04364 related cluster n=1 Tax=unknown RepID=UPI0003D04364 rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ESZ89050.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
acyl-CoA dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_1175_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10029..10589
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE6E9
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AEA26379.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1175_15
Streptomyces sp. e14, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10625..13312)
DNA (2688bp) protein (896aa)
Aldehyde oxidase and xanthine dehydrogenase domains protein (EC:1.17.1.4) rbh
Aldehyde oxidase and xanthine dehydrogenase domains protein n=1 Tax=Streptomyces sp. e14 RepID=D6KEJ0_9ACTO rbh
Aldehyde oxidase and xanthine dehydrogenase domains protein {ECO:0000313|EMBL:EFF89495.2}; TaxID=645465 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. e14.;"
SCNpilot_cont_500_bf_scaffold_1175_16
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13309..14082)
DNA (774bp) protein (258aa)
Molybdopterin binding aldehyde oxidase and xanthine dehydrogenase n=1 Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8EJ56_STRRM
FAD-binding molybdopterin dehydrogenase {ECO:0000313|EMBL:KIF72155.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
Oxidoreductase
SCNpilot_cont_500_bf_scaffold_1175_17
unknown

Not on your lists

comp(14180..14659)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00037BE5EA
SCNpilot_cont_500_bf_scaffold_1175_18
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14771..15736)
DNA (966bp) protein (322aa)
N5,N10-methylene tetrahydromethanopterin reductase n=1 Tax=Streptomyces somaliensis RepID=UPI00029A8785 rbh
luciferase family protein rbh
Luciferase family protein {ECO:0000313|EMBL:ABW16124.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
SCNpilot_cont_500_bf_scaffold_1175_19
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15848..16279)
DNA (432bp) protein (144aa)
Iron-regulated LSR2 protein n=1 Tax=Streptomyces sp. AA4 RepID=D9VFZ7_9ACTO
Iron-regulated LSR2 protein {ECO:0000313|EMBL:EFL10351.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
lysyl tRNA synthetase-like protein
SCNpilot_cont_500_bf_scaffold_1175_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16466..17731
DNA (1266bp) protein (422aa)
Serine/threonine protein kinase {ECO:0000313|EMBL:AEA26397.1}; EC=2.7.11.25 {ECO:0000313|EMBL:AEA26397.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI000373CAC8 rbh
serine/threonine protein kinase rbh
SCNpilot_cont_500_bf_scaffold_1175_21
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17762..18199
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036A9EFF
putative ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
ABC transporter {ECO:0000313|EMBL:KGH45288.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
SCNpilot_cont_500_bf_scaffold_1175_22
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18096..19316)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2QNN3_9PSEU rbh
Uncharacterized protein {ECO:0000313|EMBL:CEL14372.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1175_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19392..20951)
DNA (1560bp) protein (520aa)
mannosyltransferase; K14339 alpha-1,6-mannosyltransferase [EC:2.4.1.-]
Mannosyltransferase MptB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYE9_PSEUX
Mannosyltransferase MptB {ECO:0000313|EMBL:AEA25589.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1175_24
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21369..22094
DNA (726bp) protein (242aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0G212_AMYMS
Uncharacterized protein {ECO:0000313|EMBL:AIG79161.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1175_25
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22129..22872
DNA (744bp) protein (248aa)
ANTAR domain protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IVL3_FRASU
ANTAR domain-containing protein
ANTAR domain protein {ECO:0000313|EMBL:ADP82519.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_500_bf_scaffold_1175_26
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22869..24215
DNA (1347bp) protein (449aa)
Protein serine/threonine phosphatase with GAF(S) sensor(S) n=1 Tax=Frankia sp. CN3 RepID=G6HDL0_9ACTO
SpoIIE-like protein with GAF domain {ECO:0000313|EMBL:EXG79221.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
protein serine phosphatase with GAF(s) sensor(s)
SCNpilot_cont_500_bf_scaffold_1175_27
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24383..24757)
DNA (375bp) protein (125aa)
anti-sigma factor antagonist n=1 Tax=Mycobacterium hassiacum RepID=UPI000372F9CD
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
anti-sigma-factor antagonist
SCNpilot_cont_500_bf_scaffold_1175_28
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25087..25482
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000373E2FE
SPG23_c1, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29238.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1175_29
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25463..27019
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036F5D48 rbh
Diguanylate phosphodiesterase {ECO:0000313|EMBL:KIC68955.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
diguanylate cyclase/phosphodiesterase rbh
SCNpilot_cont_500_bf_scaffold_1175_30
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26997..28484)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G0M4_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDM80670.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
hypothetical protein
Displaying items 1-30 of 48 in total

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