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SCNpilot_cont_500_bf_scaffold_1186

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1186_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

351..3329
DNA (2979bp) protein (993aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DS
glutamate-ammonia-ligase adenylyltransferase; K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42] rbh
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPU9_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_1186_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3351..3986
DNA (636bp) protein (212aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPU7_PSEUX
lysine exporter protein LysE/YggA
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:AEA26130.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1186_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4078..4764
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0E0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26736.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1186_4
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4788..5213
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TQE1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EAP97387.1}; TaxID=313589 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1186_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5230..5664
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE684
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27622.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1186_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5661..6608
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIV4_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA22933.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1186_7
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6708..7163)
DNA (456bp) protein (152aa)
molecular chaperone DnaJ n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B010
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH53846.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
SCNpilot_cont_500_bf_scaffold_1186_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7174..7512)
DNA (339bp) protein (113aa)
X-Pro dipeptidyl-peptidase n=1 Tax=Laceyella sacchari RepID=UPI0003B7B226
Uncharacterized protein {ECO:0000313|EMBL:ETW98810.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hydrolase CocE/NonD family protein; K06978
SCNpilot_cont_500_bf_scaffold_1186_9
Zea mays, Zea, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(7549..8559)
DNA (1011bp) protein (337aa)
PREDICTED: zinc finger protein GLI4-like isoform X3 n=1 Tax=Sus scrofa RepID=UPI0003AE8410
Uncharacterized protein {ECO:0000313|EMBL:ACN26461.1}; TaxID=4577 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogoneae; Zea.;" source="Zea mays (Maize).;"
SCNpilot_cont_500_bf_scaffold_1186_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8716..9543)
DNA (828bp) protein (276aa)
Protein FdhD homolog n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CX49_PSEUX rbh
protein fdhD; K02379 FdhD protein rbh
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1186_11
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9564..11462)
DNA (1899bp) protein (633aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]; K07219 putative molybdopterin biosynthesis protein rbh
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000379491F rbh
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:ADB31202.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_500_bf_scaffold_1186_12
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11459..12679)
DNA (1221bp) protein (407aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] rbh
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00037DD5F5 rbh
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:ADB31201.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_500_bf_scaffold_1186_13
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12756..14489)
DNA (1734bp) protein (578aa)
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] rbh
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI0003772C8E rbh
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit {ECO:0000313|EMBL:ADB31200.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_500_bf_scaffold_1186_14
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14486..17395)
DNA (2910bp) protein (970aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] rbh
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00036FAB17 rbh
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:ADB31199.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_500_bf_scaffold_1186_15
Rhodococcus sp. PML026, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17436..18830)
DNA (1395bp) protein (465aa)
Putative amidase {ECO:0000313|EMBL:KJV03814.1}; EC=3.5.1.4 {ECO:0000313|EMBL:KJV03814.1};; TaxID=1356405 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. PML026.;"
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00035E2421 rbh
amidase rbh
SCNpilot_cont_500_bf_scaffold_1186_16
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18821..20593)
DNA (1773bp) protein (591aa)
aldehyde ferredoxin oxidoreductase (EC:1.2.7.5); K03738 aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] rbh
Aldehyde ferredoxin oxidoreductase {ECO:0000313|EMBL:ADB31198.1}; EC=1.2.7.5 {ECO:0000313|EMBL:ADB31198.1};; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00036B67DF rbh
SCNpilot_cont_500_bf_scaffold_1186_17
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20595..21452)
DNA (858bp) protein (286aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256|HAMAP-Rule:MF_00316}; TaxID=479435 species="Bacteria
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PS73_KRIFD rbh
Molybdopterin-guanine dinucleotide biosynthesis protein A-like protein rbh
SCNpilot_cont_500_bf_scaffold_1186_18
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21648..23885)
DNA (2238bp) protein (746aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037716A0 rbh
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
secA2; Protein translocase subunit rbh
SCNpilot_cont_500_bf_scaffold_1186_19
Rhodococcus sp. PML026, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23896..24990)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI0003480EC7 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJV00281.1}; TaxID=1356405 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. PML026.;"
transcriptional regulator CdaR
SCNpilot_cont_500_bf_scaffold_1186_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25194..25766
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CP58_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23324.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1186_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25754..27694
DNA (1941bp) protein (647aa)
YhgE/Pip C-terminal domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CP57_PSEUX rbh
hypothetical protein; K01421 putative membrane protein rbh
YhgE/Pip C-terminal domain protein {ECO:0000313|EMBL:AEA23323.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1186_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27819..28769)
DNA (951bp) protein (317aa)
endonuclease/exonuclease/phosphatase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDBF0
hypothetical protein
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:AEA24893.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1186_23
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28879..29496
DNA (618bp) protein (206aa)
Pyridoxamine 5'-phosphate oxidase, FMN-binding {ECO:0000313|EMBL:CCH15544.1}; EC=1.4.3.- {ECO:0000313|EMBL:CCH15544.1};; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
Pyridoxamine 5'-phosphate oxidase, FMN-binding n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KVE7_9ACTO
pyridoxamine 5'-phosphate oxidase-like protein; K07006
SCNpilot_cont_500_bf_scaffold_1186_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29490..30494)
DNA (1005bp) protein (335aa)
2OG-Fe(II) oxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQD8_PSEUX rbh
2OG-Fe(II) oxygenase; K06892 rbh
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:AEA28411.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1186_25
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30758..31828
DNA (1071bp) protein (357aa)
membrane protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI00023794E9 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAM03254.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
SCNpilot_cont_500_bf_scaffold_1186_26
unknown

Not on your lists

comp(31891..32211)
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1186_27
unknown

Not on your lists

32300..32707
DNA (408bp) protein (136aa)

This feature has no annotations

Displaying 27 items

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