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SCNpilot_cont_500_bf_scaffold_1394

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1394_1
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(75..860)
DNA (786bp) protein (262aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100) rbh
3-oxoacyl-ACP reductase n=1 Tax=Rhodococcus opacus M213 RepID=K8XPL9_RHOOP rbh
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EKT82781.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
SCNpilot_cont_500_bf_scaffold_1394_2
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(889..1689)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XB32_NAKMY rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV81324.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_500_bf_scaffold_1394_3
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(1686..2189)
DNA (504bp) protein (168aa)
alpha/beta fold family hydrolase (EC:1.11.1.10)
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AFY89319.1}; EC=1.11.1.10 {ECO:0000313|EMBL:AFY89319.1};; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
Alpha/beta hydrolase fold protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U522_9CYAN
SCNpilot_cont_500_bf_scaffold_1394_4
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2653..3633
DNA (981bp) protein (327aa)
LysR family transcriptional regulator n=1 Tax=Amycolatopsis balhimycina RepID=UPI000366BD14 rbh
LysR family transcriptional regulator rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:AEK42573.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_cont_500_bf_scaffold_1394_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4104..4634)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVR6_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24626.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1394_6
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5059..9906
DNA (4848bp) protein (1616aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SGP0_GEOOG rbh
multi-sensor signal transduction histidine kinase rbh
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADB72922.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_500_bf_scaffold_1394_7
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10061..11923
DNA (1863bp) protein (621aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00036C37C9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJK14005.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
putative PAS/PAC sensor protein
SCNpilot_cont_500_bf_scaffold_1394_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11920..12315
DNA (396bp) protein (132aa)
Anti-sigma factor antagonist n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZA1_CONWI
anti-sigma-factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_cont_500_bf_scaffold_1394_9
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12312..12710
DNA (399bp) protein (133aa)
ATP-binding region ATPase domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S4R6_GEOOG
ATPase domain-containing protein
ATP-binding region ATPase domain protein {ECO:0000313|EMBL:ADB77216.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_500_bf_scaffold_1394_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12717..13373
DNA (657bp) protein (219aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:AEA24622.1}; EC=1.7.99.4 {ECO:0000313|EMBL:AEA24622.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Formate dehydrogenase, alpha subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVR2_PSEUX
SCNpilot_cont_500_bf_scaffold_1394_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13482..16016
DNA (2535bp) protein (845aa)
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:AEA24622.1}; EC=1.7.99.4 {ECO:0000313|EMBL:AEA24622.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
Formate dehydrogenase, alpha subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVR2_PSEUX
SCNpilot_cont_500_bf_scaffold_1394_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16016..16942
DNA (927bp) protein (309aa)
4Fe-4S ferredoxin n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002378850 rbh
4Fe-4S ferredoxin; K00124 formate dehydrogenase, beta subunit rbh
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:AEA24621.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1394_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17020..17943
DNA (924bp) protein (308aa)
Polysulphide reductase, NrfD n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVR0_PSEUX rbh
polysulfide reductase NrfD rbh
Polysulphide reductase, NrfD {ECO:0000313|EMBL:AEA24620.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1394_trna_1
unknown

Not on your lists

comp(18010..18101)
DNA (92bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_1394_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(18119..20002)
DNA (1884bp) protein (628aa)
Selenocysteine-specific translation elongation factor n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CU51_PSEUX rbh
selenocysteine-specific translation elongation factor; K03833 selenocysteine-specific elongation factor rbh
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:AEA23770.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1394_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19993..21465)
DNA (1473bp) protein (491aa)
L-seryl-tRNA selenium transferase; K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] rbh
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00035F1A31 rbh
SCNpilot_cont_500_bf_scaffold_1394_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21538..22380
DNA (843bp) protein (281aa)
Selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] rbh
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Selenide, water dikinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CU53_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_1394_17
unknown

Not on your lists

comp(22843..23064)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1394_18
unknown

Not on your lists

comp(23164..23355)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1394_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23819..24613
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK32_PSEUX rbh
hypothetical protein; K07034 rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA28138.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1394_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25024..25743
DNA (720bp) protein (240aa)
Nitrate reductase {ECO:0000313|EMBL:AEA26391.1}; EC=1.7.99.4 {ECO:0000313|EMBL:AEA26391.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Nitrate reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUS7_PSEUX
nitrate reductase
SCNpilot_cont_500_bf_scaffold_1394_21
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25824..26243
DNA (420bp) protein (140aa)
Uncharacterized anaerobic dehydrogenase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RMJ4_BLASD
hypothetical protein
Uncharacterized anaerobic dehydrogenase {ECO:0000313|EMBL:CCG03829.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCNpilot_cont_500_bf_scaffold_1394_22
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26240..26740
DNA (501bp) protein (167aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0FTX3_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK45199.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_cont_500_bf_scaffold_1394_23
unknown

Not on your lists

comp(27128..27598)
DNA (471bp) protein (157aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1394_24
unknown

Not on your lists

comp(27848..28204)
DNA (357bp) protein (119aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1394_25
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28351..29361)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BRL9_MYCCN rbh
short-chain dehydrogenase of unknown substrate specificity rbh
Uncharacterized protein {ECO:0000313|EMBL:AFM19926.1}; Flags: Precursor;; TaxID=710421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
SCNpilot_cont_500_bf_scaffold_1394_26
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29358..30365)
DNA (1008bp) protein (336aa)
Aldose 1-epimerase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EYV8_MODMB rbh
aldose 1-epimerase rbh
Aldose 1-epimerase {ECO:0000313|EMBL:CCH88571.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
SCNpilot_cont_500_bf_scaffold_1394_27
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30362..32188)
DNA (1827bp) protein (609aa)
Glycosyl hydrolase, glucoamylase n=1 Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BRL8_MYCCN rbh
glycosyl hydrolase, glucoamylase rbh
Glycoside hydrolase {ECO:0000313|EMBL:KDE97750.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19b1 = JCM 16368.;"
SCNpilot_cont_500_bf_scaffold_1394_28
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32219..33709)
DNA (1491bp) protein (497aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI0003738C62 rbh
oxidoreductase protein rbh
Oxidoreductase, molybdopterin binding protein {ECO:0000313|EMBL:ABG05645.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
SCNpilot_cont_500_bf_scaffold_1394_29
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33714..34817)
DNA (1104bp) protein (368aa)
Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WC12_KINRD rbh
peptidase S1 and S6 chymotrypsin/Hap rbh
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:ABS04351.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
Displaying items 1-30 of 40 in total

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