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SCNpilot_cont_500_bf_scaffold_1421

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1421_1
unknown

Not on your lists

305..550
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1421_2
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(840..2756)
DNA (1917bp) protein (639aa)
N-methylhydantoinase n=1 Tax=Rhodococcus opacus RepID=UPI00029CB2F0 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHK34469.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
5-oxoprolinase rbh
SCNpilot_cont_500_bf_scaffold_1421_3
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2764..4791)
DNA (2028bp) protein (676aa)
5-oxoprolinase n=1 Tax=Streptomyces sp. e14 RepID=D6KD85_9ACTO rbh
5-oxoprolinase {ECO:0000313|EMBL:AJK53133.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
5-oxoprolinase rbh
SCNpilot_cont_500_bf_scaffold_1421_4
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4803..5024)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. e14 RepID=D6KD86_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAF44247.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
SCNpilot_cont_500_bf_scaffold_1421_5
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5039..5884)
DNA (846bp) protein (282aa)
Putative aldolase n=3 Tax=Bordetella bronchiseptica RepID=K4QR87_BORBO
aldolase
Putative aldolase {ECO:0000313|EMBL:CCN24517.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
SCNpilot_cont_500_bf_scaffold_1421_6
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5881..6987)
DNA (1107bp) protein (369aa)
putative acyl-CoA transferase/carnitine dehydratase (EC:5.1.99.4); K01796 alpha-methylacyl-CoA racemase [EC:5.1.99.4]
Predicted acyl-CoA transferase/carnitine dehydratase {ECO:0000313|EMBL:ACU97367.1}; EC=5.1.99.4 {ECO:0000313|EMBL:ACU97367.1};; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;"
carnitine dehydratase n=1 Tax=Amycolatopsis nigrescens RepID=UPI000374A7E7
SCNpilot_cont_500_bf_scaffold_1421_7
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6984..8915)
DNA (1932bp) protein (644aa)
hypothetical protein n=1 Tax=Rhodococcus sp. DK17 RepID=UPI000365AAE2 rbh
Monooxygenase {ECO:0000313|EMBL:KKC06720.1}; TaxID=244292 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
fad-dependent monooxygenase
SCNpilot_cont_500_bf_scaffold_1421_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8952..10583)
DNA (1632bp) protein (544aa)
AMP-binding enzyme id=4177616 bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ligase
Tax=GWC2_Rokubacteria_70_16_curated
SCNpilot_cont_500_bf_scaffold_1421_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10667..11428)
DNA (762bp) protein (254aa)
3-oxoacyl-ACP reductase; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] rbh
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEA26264.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEA26264.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT46_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_1421_10
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11500..12126)
DNA (627bp) protein (209aa)
Transcriptional regulator, TetR family n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A5X9_THECD
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66214.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1421_11
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12284..12811)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NFK8_9ACTO
Thioesterase superfamily protein {ECO:0000313|EMBL:EME18734.1}; TaxID=1278077 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii BKS 20-40.;"
thioesterase superfamily protein
SCNpilot_cont_500_bf_scaffold_1421_12
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12808..13293)
DNA (486bp) protein (162aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PMJ8_9ACTO
Enoyl-CoA hydratase {ECO:0000313|EMBL:EME18735.1}; TaxID=1278077 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii BKS 20-40.;"
SCNpilot_cont_500_bf_scaffold_1421_13
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13290..14999)
DNA (1710bp) protein (570aa)
AMP-dependent synthetase and ligase; K12508 feruloyl-CoA synthase [EC:6.2.1.34]
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PUZ9_9ACTO rbh
Feruloyl-CoA synthase {ECO:0000313|EMBL:EME18736.1}; TaxID=1278077 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii BKS 20-40.;"
SCNpilot_cont_500_bf_scaffold_1421_14
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14996..15928)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NEW7_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EXU64152.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
NAD-binding 3-hydroxyacyl-CoA dehydrogenase
SCNpilot_cont_500_bf_scaffold_1421_15
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15955..17400)
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Rhodococcus erythropolis RepID=UPI000305E8A8 rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:EXU64130.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
aldehyde dehydrogenase family protein rbh
SCNpilot_cont_500_bf_scaffold_1421_16
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17384..18280)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NFK3_9ACTO rbh
2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase {ECO:0000313|EMBL:EXU64129.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
alpha/beta hydrolase rbh
SCNpilot_cont_500_bf_scaffold_1421_17
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18277..19233)
DNA (957bp) protein (319aa)
2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01653}; EC=1.13.11.16 {ECO:0000256|HAMAP-Rule:MF_01653};; 3-carboxyethylcatechol 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01653}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
mhpB; 3-(2,3-dihydroxyphenyl)propionate dioxygenase (EC:1.13.11.16); K05713 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16] rbh
2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PMJ3_9ACTO rbh
SCNpilot_cont_500_bf_scaffold_1421_18
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19329..20252
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NFJ9_9ACTO rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EXU64127.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
LysR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1421_19
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20233..21426)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI000378B9DE rbh
Putative cytochrome P450 hydroxylase {ECO:0000313|EMBL:EWC61067.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
Cytochrome P450
Displaying 19 items

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