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SCNpilot_cont_500_bf_scaffold_1637

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1637_1
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..1144)
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036296E9
Peptidase {ECO:0000313|EMBL:KDN21694.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
peptidase
SCNpilot_cont_500_bf_scaffold_1637_2
Rhodococcus sp. PML026, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1235..2101)
DNA (867bp) protein (289aa)
Ubiquinone biosynthesis O-methyltransferase {ECO:0000313|EMBL:KJU99977.1}; EC=2.1.1.222 {ECO:0000313|EMBL:KJU99977.1};; TaxID=1356405 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. PML026.;"
Aureobasidin A1 biosynthesis complex n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DHQ3_9NOCA
SCNpilot_cont_500_bf_scaffold_1637_3
Rhodococcus sp. B7740, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2212..2886
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000378B4AA
Uncharacterized protein {ECO:0000313|EMBL:AJW40835.1}; TaxID=1564114 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. B7740.;"
SCNpilot_cont_500_bf_scaffold_1637_4
Rhodococcus sp. MEB064, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2883..3857
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036EAF7C rbh
Contig_74, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ08047.1}; TaxID=1587522 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. MEB064.;"
SnoK-like protein rbh
SCNpilot_cont_500_bf_scaffold_1637_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3932..4672)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMK4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23988.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1637_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4750..6006
DNA (1257bp) protein (419aa)
Glycosyl transferase group 1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMJ3_PSEUX rbh
group 1 glycosyl transferase rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEA23977.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1637_7
unknown

Not on your lists

comp(6008..6166)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1637_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6241..6999)
DNA (759bp) protein (253aa)
Acetyltransferase (Isoleucine patch superfamily)-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKY3_PSEUX rbh
acetyltransferase (isoleucine patch superfamily)-like protein rbh
Acetyltransferase (Isoleucine patch superfamily)-like protein {ECO:0000313|EMBL:AEA23976.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1637_9
unknown

Not on your lists

7051..7263
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1637_10
RIFOXYB1_FULL_Caulobacterales_67_16_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7295..8116
DNA (822bp) protein (274aa)
PfkB domain-containing protein; K00852 ribokinase [EC:2.7.1.15]
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000376313F rbh
Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
SCNpilot_cont_500_bf_scaffold_1637_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8361..8948
DNA (588bp) protein (196aa)
inosine/uridine-preferring nucleoside hydrolase; K01250 pyrimidine-specific ribonucleoside hydrolase [EC:3.2.-.-]
Inosine/uridine-preferring nucleoside hydrolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMN5_PSEUX
Inosine/uridine-preferring nucleoside hydrolase {ECO:0000313|EMBL:AEA24402.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1637_12
unknown

Not on your lists

comp(9339..9941)
DNA (603bp) protein (201aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1637_13
unknown

Not on your lists

comp(9938..10399)
DNA (462bp) protein (154aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1637_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10396..11007)
DNA (612bp) protein (204aa)
Transcriptional regulator, LuxR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKY1_PSEUX
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEA23974.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1637_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11060..11704)
DNA (645bp) protein (215aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKY0_PSEUX rbh
LuxR family transcriptional regulator rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEA23973.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1637_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11680..12819)
DNA (1140bp) protein (380aa)
Putative signal transduction histidine kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKX9_PSEUX rbh
signal transduction histidine kinase rbh
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AEA23972.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1637_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12863..13816)
DNA (954bp) protein (318aa)
Methyltransferase type 11 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKX8_PSEUX rbh
type 11 methyltransferase rbh
Methyltransferase type 11 {ECO:0000313|EMBL:AEA23971.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1637_18
unknown

Not on your lists

13987..14106
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1637_19
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14110..14889)
DNA (780bp) protein (260aa)
enoyl-CoA hydratase; K01692 enoyl-CoA hydratase [EC:4.2.1.17] rbh
Enoyl-CoA hydratase/isomerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKX7_PSEUX rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:EWM16222.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
SCNpilot_cont_500_bf_scaffold_1637_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14986..15822)
DNA (837bp) protein (279aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] rbh
ABC transporter related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKX6_PSEUX rbh
ABC transporter related protein {ECO:0000313|EMBL:AEA23969.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1637_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15885..17894
DNA (2010bp) protein (670aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
glycogen debranching protein GlgX; K02438 glycogen operon protein GlgX [EC:3.2.1.-] rbh
Glycogen debranching enzyme GlgX n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKX5_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_1637_22
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18165..18374
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Nocardiopsis prasina RepID=UPI000376BE30
regulatory , FmdB family domain protein
Regulatory , FmdB family domain protein {ECO:0000313|EMBL:AFR07456.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
SCNpilot_cont_500_bf_scaffold_1637_23
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18514..18852
DNA (339bp) protein (113aa)
Putative mannose-specific lectin n=10 Tax=Mycobacterium abscessus RepID=H0IAR3_MYCAB
Putative mannose-specific lectin {ECO:0000313|EMBL:EHM20442.1}; TaxID=1091046 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus subsp. bolletii BD.;"
putative mannose-specific lectin
SCNpilot_cont_500_bf_scaffold_1637_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18897..21461)
DNA (2565bp) protein (855aa)
alpha-glucan phosphorylase; K00688 starch phosphorylase [EC:2.4.1.1] rbh
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Phosphorylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKX3_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_1637_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21690..23660
DNA (1971bp) protein (657aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKX2_PSEUX rbh
alpha amylase rbh
SCNpilot_cont_500_bf_scaffold_1637_26
unknown

Not on your lists

comp(23483..24046)
DNA (564bp) protein (188aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1637_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24085..25815
DNA (1731bp) protein (577aa)
trehalose synthase; K05343 maltose alpha-D-glucosyltransferase [EC:5.4.99.16] rbh
Trehalose synthase {ECO:0000313|EMBL:AEA23964.1}; EC=5.4.99.16 {ECO:0000313|EMBL:AEA23964.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Trehalose synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKX1_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_1637_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25812..27230
DNA (1419bp) protein (473aa)
Aminoglycoside phosphotransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKX0_PSEUX rbh
aminoglycoside phosphotransferase rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AEA23963.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Displaying 28 items

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