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SCNpilot_cont_500_bf_scaffold_3104

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3104_1
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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1..159
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00037D83CF
DeoR family transcriptional regulator
DeoR family transcriptional regulator {ECO:0000313|EMBL:AGZ41814.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_500_bf_scaffold_3104_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(440..952)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIW1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22940.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_3104_3
Nocardia cyriacigeorgica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(974..1600)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Nocardia cyriacigeorgica (strain GUH-2) RepID=H6R4Q3_NOCCG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCF63319.1}; TaxID=1127134 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia cyriacigeorgica (strain GUH-2).;"
SCNpilot_cont_500_bf_scaffold_3104_4
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1597..2871)
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI0003820E4D rbh
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:ETK37872.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
rpoE; RNA polymerase sigma-70 factor, ECF subfamily rbh
SCNpilot_cont_500_bf_scaffold_3104_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2868..3191)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI000376905A
Uncharacterized protein {ECO:0000313|EMBL:EXG80675.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
YCII-like protein
SCNpilot_cont_500_bf_scaffold_3104_6
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3250..4290)
DNA (1041bp) protein (347aa)
5''''-3'''' exonuclease n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B2F17A rbh
5'-3' exonuclease rbh
5'-3' exonuclease, N-terminal resolvase-like domain protein {ECO:0000313|EMBL:ADG76090.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_500_bf_scaffold_3104_7
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4345..4806)
DNA (462bp) protein (154aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
Alkylhydroperoxidase AhpD family core domain protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X567_9PSEU
carboxymuconolactone decarboxylase family protein
SCNpilot_cont_500_bf_scaffold_3104_8
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4881..5744
DNA (864bp) protein (288aa)
ECF subfamily RNA polymerase sigma factor n=1 Tax=Streptomyces auratus AGR0001 RepID=J1SBG0_9ACTO
RNA polymerase sigma 70 {ECO:0000313|EMBL:KJK55418.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
SCNpilot_cont_500_bf_scaffold_3104_9
unknown

Not on your lists

comp(5745..6092)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF010
SCNpilot_cont_500_bf_scaffold_3104_10
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6352..7764
DNA (1413bp) protein (471aa)
alkane 1-monooxygenase (EC:1.14.15.3); K00496 alkane 1-monooxygenase [EC:1.14.15.3] rbh
alkane 1-monooxygenase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF259 rbh
Alkane 1-monooxygenase {ECO:0000313|EMBL:EFL10927.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
SCNpilot_cont_500_bf_scaffold_3104_11
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7767..7958
DNA (192bp) protein (64aa)
ferredoxin n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000363BC3B
fer; ferredoxin
Ferredoxin {ECO:0000313|EMBL:AGM06858.1}; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
SCNpilot_cont_500_bf_scaffold_3104_12
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7987..9222
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000379249F rbh
Uncharacterized protein {ECO:0000313|EMBL:AIG75399.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3104_13
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9398..9604)
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:CEL19764.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
SCNpilot_cont_500_bf_scaffold_3104_14
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9786..10391
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026268EE
Uncharacterized protein {ECO:0000313|EMBL:AIJ24077.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3104_15
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10471..10689
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:AHH98813.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
SCNpilot_cont_500_bf_scaffold_3104_16
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10752..11108)
DNA (357bp) protein (119aa)
Putative transcriptional regulator n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X5S7_9PSEU
ArsR-family transcriptional regulator {ECO:0000313|EMBL:EWM10273.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
SCH35.02; transcriptional regulator; K03892 ArsR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_3104_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(11618..12913)
DNA (1296bp) protein (432aa)
Ig domain protein group 1 domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F882_CONWI
Ig domain-containing protein group 1 domain-containing protein
Ig domain protein group 1 domain protein {ECO:0000313|EMBL:ADB48952.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 17 items

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