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SCNpilot_cont_500_bf_scaffold_3536

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3536_1
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42..1376)
DNA (1335bp) protein (445aa)
ATP-dependent OLD family endonuclease n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B0ED rbh
Uncharacterized protein {ECO:0000313|EMBL:AIR96750.1}; TaxID=1907 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
SMC domain-containing protein
SCNpilot_cont_500_bf_scaffold_3536_2
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1505..3244)
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Mycobacterium abscessus subsp. bolletii BD RepID=H0IJL7_MYCAB
Uncharacterized protein {ECO:0000313|EMBL:EHM23323.1}; TaxID=1091046 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus subsp. bolletii BD.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3536_3
Rhodococcus imtechensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3559..5217)
DNA (1659bp) protein (553aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI0003614F71 rbh
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EID71909.1}; TaxID=1165867 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RKJ300 = JCM 13270.;"
AMP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_3536_4
Rhodococcus imtechensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5748..6029
DNA (282bp) protein (94aa)
NADP-dependent oxidoreductase n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WNM1_9NOCA
NADP-dependent oxidoreductase {ECO:0000313|EMBL:EID77987.1}; TaxID=1165867 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RKJ300 = JCM 13270.;"
NADP-dependent oxidoreductase
SCNpilot_cont_500_bf_scaffold_3536_5
Gordonia paraffinivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6016..7215)
DNA (1200bp) protein (400aa)
Putative CdaR family transcriptional regulator n=1 Tax=Gordonia paraffinivorans NBRC 108238 RepID=M3V7M7_9ACTO rbh
Putative CdaR family transcriptional regulator {ECO:0000313|EMBL:GAC86252.1}; TaxID=1223543 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3536_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7325..8341
DNA (1017bp) protein (339aa)
polysaccharide deacetylase n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002379BAD rbh
polysaccharide deacetylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCNpilot_cont_500_bf_scaffold_3536_7
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8338..9111
DNA (774bp) protein (258aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-ACP reductase n=1 Tax=Salinispora pacifica RepID=UPI00035F6D25
Uncharacterized protein {ECO:0000313|EMBL:KID28464.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
SCNpilot_cont_500_bf_scaffold_3536_8
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9315..10139)
DNA (825bp) protein (275aa)
DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VVQ8_9ACTO rbh
DNA-(apurinic or apyrimidinic site) lyase rbh
DNA-(Apurinic or apyrimidinic site) lyase {ECO:0000313|EMBL:AGZ41043.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_500_bf_scaffold_3536_9
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10146..10946)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6K4V2_STRNV rbh
Uncharacterized protein {ECO:0000313|EMBL:EST26441.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
PEP phosphonomutase-like enzyme
SCNpilot_cont_500_bf_scaffold_3536_10
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11005..11505
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI000380FB78
HxlR family transcriptional regulator {ECO:0000313|EMBL:ETK33600.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
HxlR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_3536_11
unknown

Not on your lists

comp(11493..11630)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3536_12
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12074..12910
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Nocardiopsis synnemataformans RepID=UPI0003696BFC rbh
Kitasatospora griseola strain MF730-N6 RKJC_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ65969.1}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3536_13
Gordonia effusa, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13064..13573
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Gordonia effusa NBRC 100432 RepID=H0QWX6_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB17327.1}; TaxID=1077974 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia effusa NBRC 100432.;"
MaoC-like dehydratase
SCNpilot_cont_500_bf_scaffold_3536_14
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13574..14203
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036CCE64
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFQ83387.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
major facilitator superfamily multidrug resistance protein
SCNpilot_cont_500_bf_scaffold_3536_15
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14283..14960
DNA (678bp) protein (226aa)
DNA repair protein RadC n=1 Tax=Segniliparus rugosus ATCC BAA-974 RepID=E5XQ70_9ACTO
DNA repair protein {ECO:0000313|EMBL:KGN33897.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
DNA repair protein RadC; K03630 DNA repair protein RadC
SCNpilot_cont_500_bf_scaffold_3536_16
unknown

Not on your lists

comp(14938..15180)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002379EF9
SCNpilot_cont_500_bf_scaffold_3536_17
unknown

Not on your lists

15293..15514
DNA (222bp) protein (74aa)

This feature has no annotations

Displaying 17 items

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