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SCNpilot_cont_500_bf_scaffold_3882

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3882_trna_1
unknown

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1..68
DNA (68bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_3882_1
Mycobacterium setense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(705..1238)
DNA (534bp) protein (178aa)
transposase ISMsm4 n=1 Tax=Dietzia alimentaria RepID=UPI00029B1855
Uncharacterized protein {ECO:0000313|EMBL:KHO22381.1}; TaxID=431269 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium setense.;"
transposase, degenerate
SCNpilot_cont_500_bf_scaffold_3882_2
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1293..1481)
DNA (189bp) protein (63aa)
Transposase IS204/IS1001/IS1096/IS1165 family protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SDE4_INTC7
transposase IS204/IS1001/IS1096/IS1165 family protein
Transposase IS204/IS1001/IS1096/IS1165 family protein {ECO:0000313|EMBL:ADU47566.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
SCNpilot_cont_500_bf_scaffold_3882_3
Streptomyces sp. SPB78, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1833..3077
DNA (1245bp) protein (415aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. SPB78 RepID=D9UPA1_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EFK97949.1}; TaxID=591157 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SPB78).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3882_4
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3068..3844)
DNA (777bp) protein (259aa)
Bacteriophage protein gp37 n=1 Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BTI7_MYCCN rbh
bacteriophage protein gp37 rbh
Bacteriophage protein gp37 {ECO:0000313|EMBL:AFM20594.1}; Flags: Precursor;; TaxID=710421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
SCNpilot_cont_500_bf_scaffold_3882_5
unknown

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3950..4321
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3882_6
unknown

Not on your lists

4361..5032
DNA (672bp) protein (224aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3882_7
unknown

Not on your lists

5033..6184
DNA (1152bp) protein (384aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3882_8
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6174..6809)
DNA (636bp) protein (212aa)
Resolvase domain n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WG98_KINRD
Resolvase domain
Resolvase domain {ECO:0000313|EMBL:ABS05837.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
SCNpilot_cont_500_bf_scaffold_3882_9
Emiliania huxleyi, Emiliania, Isochrysidales, Eukaryota

Not on your lists

comp(7034..7750)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Emiliania huxleyi CCMP1516 RepID=R1DSU1_EMIHU
Uncharacterized protein {ECO:0000313|EMBL:EOD13846.1, ECO:0000313|EnsemblProtists:EOD13846}; TaxID=280463 species="Eukaryota; Haptophyceae; Isochrysidales; Noelaerhabdaceae; Emiliania.;" source="Emiliania huxleyi CCMP1516.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3882_10
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9746..10183
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5WZ74_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHR48475.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
SCNpilot_cont_500_bf_scaffold_3882_11
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10605..11294)
DNA (690bp) protein (230aa)
prepilin peptidase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
Prepilin signal peptidase PulO-like peptidase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5WXA8_9PSEU
Prepilin signal peptidase PulO-like peptidase {ECO:0000313|EMBL:EHR48382.1}; Flags: Precursor;; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
SCNpilot_cont_500_bf_scaffold_3882_12
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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11548..11922
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037A528B
Putative secreted protein/lipoprotein {ECO:0000313|EMBL:EWC64528.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3882_13
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11916..12704
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI000380775B
Putative ATP/GTP-binding protein {ECO:0000313|EMBL:EWC64529.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3882_14
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12701..12835
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5WXA6_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHR48380.1}; Flags: Precursor;; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
SCNpilot_cont_500_bf_scaffold_3882_15
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12955..13452
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003615AE7
SAF domain-containing protein {ECO:0000313|EMBL:EHR48379.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
SAF domain-containing protein
SCNpilot_cont_500_bf_scaffold_3882_16
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13600..14487
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036A64DD
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:EHR48378.1}; Flags: Precursor;; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3882_17
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14484..15158
DNA (675bp) protein (225aa)
Flp pilus assembly protein, ATPase CpaF n=1 Tax=Saccharomonospora marina XMU15 RepID=H5WXA3_9PSEU
Flp pilus assembly protein, ATPase CpaF {ECO:0000313|EMBL:EHR48377.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
type II secretion system protein E
Displaying 18 items

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