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SCNpilot_cont_500_bf_scaffold_733_32

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(29213..31051)

Top 3 Functional Annotations

Value Algorithm Source
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ15_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 623.0
  • Bit_score: 747
  • Evalue 1.10e-212
  • rbh
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 623.0
  • Bit_score: 747
  • Evalue 3.50e-213
  • rbh
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:AEA24306.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 623.0
  • Bit_score: 747
  • Evalue 1.60e-212

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1839
GTGACCGCCCTGGACGTCGAGTCCGCGCGGCGACGCTTCTGGGCCGACGGGCCCGGTGCCGCCGCGGGGTCGGTGCGCGCCGAGGTGCTGGCGTCCTGGGAGCGGTCGGCCGGCGTCGACGTCCGCGCGGTCGGGGCGCCGTTCGTCGGCCACGACGCCGCGGCCCCCGGGGTGGCCGACGCCGGCGACGTGTTCGAGGAGTTCCACCGGCGCAACCCCGACGCCGGCTGCTCGCTGGCCCTGGTCGACGCCGACGGGGTGGTGCGGGTCCGGCGCGACGGCGGGCGGGCGCTGGCCGAGGTGCTCGACGCCGTCCGGTTCGTCCCGGGCTACCGCTACGACGAGACGGCCATGGGCACCACCGCCGCCGCGATCGCCCTCCACACGGGCTCGGACGCCCGCGTCGACGGGGCGGAGCACCTGCACGCCGACCTGACGTGGCTCGCCGAGGCGGCCGCGCTGGTGCCCGACGGGGCGGTCGTCGTCGTGCTCACCCACGTCACCGCGCCGCACCCCGGTCTGGTCGTGGCCCGGCTGCTCGCGGACCAGGTGGCCGAGCGGGTGGCGTCGCGCCGGCACCGGGTGGCGCGCTCGGTGCACGACGGCTTCGCGGACGCCTGCGGCGCCGGGGCGGAGTGGGTGGTGGCCACCGACGGGGACTTCGTCCTCACGAACGCGGGCGTCCGCAAGATCGCCGCCGACGACCAGCAGATCCTCGCCGACCTGGCCCTCGCCGGCGCCGTCCTGCCCGACGGGCACGGGAGCCGCCACGTCGACCTGCCGTCCGGCCACTGCGCGGAGGTGGGCGTCACGGCCCTGCGCCTGGACGGCTCCACCGTCGGCTGCGTTCTGGCCGGCGGTCTCGCCGCGGCCCGGCAGGCCGGGGCGGTCCCGGACGCCCTGCGCCGCCAGGGGTCGCACGTGGCGTCCACCGCGCGCCGCGACTACGCCGCCGACCTGCACGGGCCGTCCTCGGCGGAGCGGGCGCACGCCGAGGCCAGGGCGCGGGCCAACCGCGAGCTGCTCAGCCCGTACCTGCGGGCCCGTCAGGAGGTGGCCACGAGCGTCGGCCAGCGCCGCCACCACCTGCTGATGGGCGAGGCCGGCGTCGGCAAGCGCACCCTGGCCGTGGAGCAGTTCCGCCGGACGTTCCCGACCGGGACGCTGCGCAGCCTGGACTGCTCGGGGGTGAGCGACTCGGCCAGCGCCCCGGACCCGCTCGCCCAGGTCACCCGCGATCTCGACGACCAGCCCCGCATGCTGGTGCTGCGGCAGATGAACCTGCTCTCGCCGGTGGCCGCCCGCCGCCTCGACGAGTCGCTGCGCACGCTCGTGGCGATGCCGAGCGCGCTGATCGTGGTCGGCTGCGTCGACGCGGTGTCCGCCGACGCCACCCGTCCCTACGGCCTGCTGCTGCGCCACTTCCACGAGACGGTGCGGGTGCCGGCCCTGCGCTACCGGGCTGACGAGCTGGGCGAGATCGCGCTGTCGATCCTGCGCAGCCTCACCGGCGGCCGGTCGCTGCGGCTGAGCCTGCAGGTGATCCGGGTGCTGGAGGGCTACGCGTGGCCGGGCAACGTCCGCGAGCTGGAGGACGTGCTCCGGTACGTGATCGCGCGCAAGCCCGTCGGGGTGATCCAGGCGCCCGACCTGCCGGCGTCGTGCTTCGCCGCCCGTGCCCCGAAGCTGTCGATGCTGGAGTCCGCGCAGTGCGACGCGATCATCCAGGCGCTCTACGAGTCGGGCGGCAACCGGTACAAGGCCGCCGCGATGCTGGGCATCGCGCGGTCCTCGCTCTACCGCAAGATCGACGCGTTCGGGATCAGCTACATCGCGTGA
PROTEIN sequence
Length: 613
VTALDVESARRRFWADGPGAAAGSVRAEVLASWERSAGVDVRAVGAPFVGHDAAAPGVADAGDVFEEFHRRNPDAGCSLALVDADGVVRVRRDGGRALAEVLDAVRFVPGYRYDETAMGTTAAAIALHTGSDARVDGAEHLHADLTWLAEAAALVPDGAVVVVLTHVTAPHPGLVVARLLADQVAERVASRRHRVARSVHDGFADACGAGAEWVVATDGDFVLTNAGVRKIAADDQQILADLALAGAVLPDGHGSRHVDLPSGHCAEVGVTALRLDGSTVGCVLAGGLAAARQAGAVPDALRRQGSHVASTARRDYAADLHGPSSAERAHAEARARANRELLSPYLRARQEVATSVGQRRHHLLMGEAGVGKRTLAVEQFRRTFPTGTLRSLDCSGVSDSASAPDPLAQVTRDLDDQPRMLVLRQMNLLSPVAARRLDESLRTLVAMPSALIVVGCVDAVSADATRPYGLLLRHFHETVRVPALRYRADELGEIALSILRSLTGGRSLRLSLQVIRVLEGYAWPGNVRELEDVLRYVIARKPVGVIQAPDLPASCFAARAPKLSMLESAQCDAIIQALYESGGNRYKAAAMLGIARSSLYRKIDAFGISYIA*