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SCNpilot_cont_500_bf_scaffold_843_4

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(3112..4035)

Top 3 Functional Annotations

Value Algorithm Source
ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 307.0
  • Bit_score: 349
  • Evalue 8.30e-94
  • rbh
DNA ligase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDF5D similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 314.0
  • Bit_score: 370
  • Evalue 1.40e-99
  • rbh
ATP dependent DNA ligase {ECO:0000313|EMBL:AEA22601.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 307.0
  • Bit_score: 351
  • Evalue 9.70e-94

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGCTCGCCACCCCTGGAGACCTTCCGAAAGGTCCCGATTGGCTCTACGAGGTGAAGTGGGACGGCATGCGGCTGCTCGCCGAGGTCGTCGACGGGGTGCTCACGCTGCGCAGTCGCAGCGACCGGGACGTCACCCCGAACTTCCCCGAGCTCGCCGGACTGGTCGATCTGGCGCCCGACGTGCTGCTCGACGGCGAGGTGGTGCTGCTGGACAAGGGCGTGCCCAGCTTCCACGCGCTGGGCGACCGGATGCACTCCGTGGTGGAGGAGCGCGCGGCGCTGGCGCGGCCCGTCACGTTCATGGCCTTCGACATCCTGCGCCTCTACGGCGTCCCGCTGCTGGACCGCACGCTCGACGAGCGGCGCGCCACCCTGGAGCGGCTCAACCTCACCCCGAACCTCGCGCTCTCACCGACCTACACCGACGGCCAGGCCCTCTTCGACGCCACGGCGCAGCGCGGCATCGAGGGCGTGGTGGCCAAGCGGCGCGACGGGATCTACCGGCCCGGCCGGCGCAGCGAGGGCTGGATCAAGGTCACGCACCGGCAGACCCAGGCGTGCGTCGTCGGGGGGTGGCGTCCGGAGAACGTCGGGACGGCGCGGGTGAGCAGTTCGCGGGTGGGAGCCCTCCTGCTCGGCGTCCCGGACGCGGACGGGGTGCTGCAGTACGCCGGCCGCGTCGGCTCGGGCCTCGCCTCGGCCGCTGCTCAGCGGGCCCTGCGCGACCGGCTGGTGGACGCGGACACCCAGCCGTTCGCGGAGCGCCCGCCCCGGCCCGACGCCGTCGGCGCCCGGTGGTGCGAGCCGACCACGGTCGTCGAGGTCGTGCACAAGGGGTGGACGGACGGAGGCCGGTTGCGTCAGCCGGTCTACCGGGGGATTCGCGACGACCTGGATGTCGATCAGGTGCACGCCGAGTCGTGA
PROTEIN sequence
Length: 308
MLATPGDLPKGPDWLYEVKWDGMRLLAEVVDGVLTLRSRSDRDVTPNFPELAGLVDLAPDVLLDGEVVLLDKGVPSFHALGDRMHSVVEERAALARPVTFMAFDILRLYGVPLLDRTLDERRATLERLNLTPNLALSPTYTDGQALFDATAQRGIEGVVAKRRDGIYRPGRRSEGWIKVTHRQTQACVVGGWRPENVGTARVSSSRVGALLLGVPDADGVLQYAGRVGSGLASAAAQRALRDRLVDADTQPFAERPPRPDAVGARWCEPTTVVEVVHKGWTDGGRLRQPVYRGIRDDLDVDQVHAES*