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SCNpilot_cont_500_bf_scaffold_843

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_843_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23..1450
DNA (1428bp) protein (476aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] rbh
Amidase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQK7_PSEUX rbh
Amidase {ECO:0000313|EMBL:AEA22605.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_843_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1504..2442
DNA (939bp) protein (313aa)
prephenate dehydrogenase; K04517 prephenate dehydrogenase [EC:1.3.1.12] rbh
Prephenate dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQK6_PSEUX rbh
Prephenate dehydrogenase {ECO:0000313|EMBL:AEA22604.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_843_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2444..3031)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQK5_PSEUX
hypothetical protein; K09957 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22603.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_843_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3112..4035)
DNA (924bp) protein (308aa)
ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] rbh
DNA ligase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDF5D rbh
ATP dependent DNA ligase {ECO:0000313|EMBL:AEA22601.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_843_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4072..5001
DNA (930bp) protein (310aa)
Probable DNA repair protein Psed_0327 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQK2_PSEUX rbh
Ku protein; K10979 DNA end-binding protein Ku rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_843_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5072..6208)
DNA (1137bp) protein (379aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQK1_PSEUX rbh
cell envelope-related transcriptional attenuator rbh
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:AEA22599.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_843_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6295..6816)
DNA (522bp) protein (174aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQK0_PSEUX
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEA22598.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_843_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6895..7659
DNA (765bp) protein (255aa)
Purine or other phosphorylase family 1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQJ9_PSEUX rbh
purine or other phosphorylase 1 rbh
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:AEA22597.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_843_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7656..8267
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQJ5_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22593.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_843_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8356..9063)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ05_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27201.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_843_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9060..10670)
DNA (1611bp) protein (537aa)
(2,3-dihydroxybenzoyl)adenylate synthase {ECO:0000313|EMBL:AEA27202.1}; EC=2.7.7.58 {ECO:0000313|EMBL:AEA27202.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
AMP-dependent synthetase n=1 Tax=Amycolatopsis balhimycina RepID=UPI000379AF8D rbh
(2,3-dihydroxybenzoyl)adenylate synthase rbh
SCNpilot_cont_500_bf_scaffold_843_12
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10651..12852)
DNA (2202bp) protein (734aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037A4385 rbh
Acyl-CoA synthetase (NDP forming) {ECO:0000313|EMBL:CQD22520.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;"
CoA-binding domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_843_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12849..14417)
DNA (1569bp) protein (523aa)
monooxygenase FAD-binding protein; K09461 anthraniloyl-CoA monooxygenase [EC:1.14.13.40] rbh
2-polyprenyl-6-methoxyphenol hydroxylase n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036BEC84 rbh
Monooxygenase FAD-binding protein {ECO:0000313|EMBL:AEA27204.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_843_14
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14414..15220)
DNA (807bp) protein (269aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Amycolatopsis methanolica RepID=UPI00036A9307 rbh
Ureidoglycolate lyase {ECO:0000313|EMBL:AIJ23721.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
ureidoglycolate lyase rbh
SCNpilot_cont_500_bf_scaffold_843_15
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15217..16311)
DNA (1095bp) protein (365aa)
cupin; K00450 gentisate 1,2-dioxygenase [EC:1.13.11.4] rbh
cupin n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036EFFD4 rbh
Cupin 2 barrel domain-containing protein {ECO:0000313|EMBL:AIJ23722.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
SCNpilot_cont_500_bf_scaffold_843_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16354..17166)
DNA (813bp) protein (271aa)
Transcriptional regulator, PaaX family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ11_PSEUX rbh
PaaX family transcriptional regulator; K02616 phenylacetic acid degradation operon negative regulatory protein rbh
Transcriptional regulator, PaaX family {ECO:0000313|EMBL:AEA27207.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_843_17
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17262..17981
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003641CD1 rbh
Esterase {ECO:0000313|EMBL:KFG00801.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
putative esterase
SCNpilot_cont_500_bf_scaffold_843_18
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17982..18566)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000376227F
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EJI95937.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_843_19
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18631..19794
DNA (1164bp) protein (388aa)
Ferredoxin n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S6L7_GEOOG
Ferredoxin {ECO:0000313|EMBL:ADB75391.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
ferredoxin
SCNpilot_cont_500_bf_scaffold_843_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19834..20946)
DNA (1113bp) protein (371aa)
Esterase/lipase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNC8_PSEUX rbh
esterase rbh
Esterase/lipase {ECO:0000313|EMBL:AEA27152.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_843_21
unknown

Not on your lists

comp(20913..21050)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_843_22
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21234..21860
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSL7_PSEUX
Membrane protein {ECO:0000313|EMBL:ETK34178.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_843_23
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21879..22910)
DNA (1032bp) protein (344aa)
FMN-dependent monooxygenase n=1 Tax=Amycolatopsis balhimycina RepID=UPI000382735E rbh
FMN-dependent monooxygenase rbh
FMN-dependent monooxygenase {ECO:0000313|EMBL:AEK46325.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_cont_500_bf_scaffold_843_24
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22910..23410)
DNA (501bp) protein (167aa)
cyclase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628D2C
Cyclase/dehydrase {ECO:0000313|EMBL:AIJ22401.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
cyclase/dehydrase
SCNpilot_cont_500_bf_scaffold_843_25
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23443..23847)
DNA (405bp) protein (135aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=797057 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis subsp. vinearia.;"
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI000374BAA3
PilT domain-containing protein; K07062
SCNpilot_cont_500_bf_scaffold_843_26
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23835..24098)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI000368652A
Prevent-host-death family protein {ECO:0000313|EMBL:AFO69357.1}; TaxID=797057 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis subsp. vinearia.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_843_27
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24117..24917)
DNA (801bp) protein (267aa)
Prolyl oligopeptidase family protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5WXU3_9PSEU
Prolyl oligopeptidase family protein {ECO:0000313|EMBL:EHR51752.1}; Flags: Precursor;; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_843_28
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24983..25534
DNA (552bp) protein (184aa)
Transcriptional regulator, TetR family n=1 Tax=Frankia sp. EUN1f RepID=D3CU47_9ACTO
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFC85746.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_843_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25521..27119)
DNA (1599bp) protein (533aa)
Phenylacetone monooxygenase {ECO:0000313|EMBL:AEA27952.1}; EC=1.14.13.92 {ECO:0000313|EMBL:AEA27952.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Phenylacetone monooxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1P2_PSEUX rbh
phenylacetone monooxygenase rbh
SCNpilot_cont_500_bf_scaffold_843_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27138..28928)
DNA (1791bp) protein (597aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQD0_PSEUX rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K07222 putative flavoprotein involved in K+ transport rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AEA28403.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Displaying items 1-30 of 36 in total

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