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SCNpilot_cont_500_bf_scaffold_843_18

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(17982..18566)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000376227F similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 186.0
  • Bit_score: 217
  • Evalue 1.30e-53
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EJI95937.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 185.0
  • Bit_score: 213
  • Evalue 3.40e-52
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 183.0
  • Bit_score: 146
  • Evalue 1.10e-32

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Taxonomy

Rhodococcus sp. JVH1 → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 585
GTGGTCGAGGACAAGAGGTCCGGTCGCGGTCGGGTGCGCGATCCGGCGGTCGAGGTCGCCGTGCTGGAGGCGGCGATCACGATCCTCGCGCTCGAGGGCGTGGCGGGCACGTCGATGGATCGCGTGGCCGCGGAGGCCGGCGTGTCGAAGGTGACCGTCTACACGCGCTACCCGAGCAAGTCCGCGCTGATCGGCGCGGCGCTGACCCACCTGCAGGTCGACCACGTCCCGGAACCGACGGGCGCGGCGCGCACCGACCTCGCCGCACTGCTGGGCGCCATGCGCCGGCAGTACGACGAGGTCGGGGGCATGAGCATCATCGGGTCGTGCCTCGCCGCCGAGCCGCGCTCGCGGGAGTTGCTGGACCTCATCCGGGCCAGCACGCTGCTGCCCCGGCGCCGGCAGTTCGCCCGGGTGCTCCGGGCCGGGGTCGATCGGGGTGAGCTGCGTGCCGACCTGGACGTCGAGCGGGCGACGAGCATGCTGGTGGGGGTGCTCTACGCCGACCACCTGGCGGGGGTGCCGGCCGATCCGGGCTGGGCGACGTCGGTGGTCGACGACGTCCTGCGCGGAATCGGGGCCTGA
PROTEIN sequence
Length: 195
VVEDKRSGRGRVRDPAVEVAVLEAAITILALEGVAGTSMDRVAAEAGVSKVTVYTRYPSKSALIGAALTHLQVDHVPEPTGAARTDLAALLGAMRRQYDEVGGMSIIGSCLAAEPRSRELLDLIRASTLLPRRRQFARVLRAGVDRGELRADLDVERATSMLVGVLYADHLAGVPADPGWATSVVDDVLRGIGA*