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SCNpilot_cont_500_bf_scaffold_1565_12

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 11277..12176

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix, AraC domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SFY1_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 305.0
  • Bit_score: 380
  • Evalue 1.80e-102
  • rbh
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 305.0
  • Bit_score: 380
  • Evalue 5.60e-103
  • rbh
Helix-turn-helix, AraC domain protein {ECO:0000313|EMBL:ADB74886.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 305.0
  • Bit_score: 380
  • Evalue 2.50e-102

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGACTGGACGTGACCGGCTCCGGGATCTCCTCGACGCCGTCCTCGCCGACGACCACCGATCCCTGACCGACATGGCCGGCGGCGCGTACACGTCGCCGTTCCACTTCAGCCGGCTGCTGGCCCGCGACACCGGCGAGCCGCCGGTGGCCATGCGCCGGCGCGTCGAGCTGGAACGGGCCGCGTGGCGGCTCGCCTCCGGGTCGCCGGTGACGGAGGTGGCGTTCGCCGCCGGCTACGAGTCCGTGGACGGCTTCGCCCGCGCGTACGCCCGGGCCTTCGGCCACCCGCCCAGCGCGACGCCCGCCGGGGCACACCACTGGTTGCCCGCGCCCAACGGCATCCACTTCCACGCACCGCACAACCTGTGGGTGACCGGGGAGCCCGACGGGGCGAGCCCCGTGACGGCGCTGATGGTGCACCACGACGTCGACGACGTGCGGTCGCTGCTGGAGCTCGCGAAGGGCATTCCGGCCGCCGAGTACACCCGTGAACGCCTTCCGGGCCTCGTGCTCCTGCGCTGGGCGGGGGAGGAGCCCTCGATCGCGGCGCTGCTCAGCCGCTGCGTGGGCACCTACGAGATCTGGCTCGCCTCGATCGCCGGCGAGGACCACCCCGGCGGACCGGGCCCGGACGCGGACCCGGTGACGCTGCTGGGCCGCCTCGACGACGTCGGCCCCCGCTGGCGCGCGACGGTGCGCGACATCGAGCGCCGCCGCGCCTGGAACGACCGCCTCGTCGACGCGCTGTGCGACCCGCCCGAGAGCTTCGTGCTCGGCAGCGTCCTGGCCCACGTGCTGACCTACTCCGCGCAGCGCCGGGGCCTGGTCCGCGCGCTGCTGCGCCAGGCCGGCGCGCCGGTCGACGACGGTGACCCGATCGACTGGCTGCAACGGACCTGA
PROTEIN sequence
Length: 300
MTGRDRLRDLLDAVLADDHRSLTDMAGGAYTSPFHFSRLLARDTGEPPVAMRRRVELERAAWRLASGSPVTEVAFAAGYESVDGFARAYARAFGHPPSATPAGAHHWLPAPNGIHFHAPHNLWVTGEPDGASPVTALMVHHDVDDVRSLLELAKGIPAAEYTRERLPGLVLLRWAGEEPSIAALLSRCVGTYEIWLASIAGEDHPGGPGPDADPVTLLGRLDDVGPRWRATVRDIERRRAWNDRLVDALCDPPESFVLGSVLAHVLTYSAQRRGLVRALLRQAGAPVDDGDPIDWLQRT*