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SCNpilot_cont_500_bf_scaffold_1565

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1565_1
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..125)
DNA (123bp) protein (41aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase {ECO:0000313|EMBL:ACU77322.1}; EC=2.6.1.50 {ECO:0000313|EMBL:ACU77322.1};; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
Glutamine--scyllo-inositol transaminase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PYK0_CATAD
SCNpilot_cont_500_bf_scaffold_1565_2
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(122..1120)
DNA (999bp) protein (333aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EWC59118.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EWC59118.1};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036699AA rbh
NAD-dependent epimerase/dehydratase rbh
SCNpilot_cont_500_bf_scaffold_1565_3
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1227..1691)
DNA (465bp) protein (155aa)
NUDIX hydrolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYK7_PSEUX
Putative NTP pyrophosphohydrolase {ECO:0000313|EMBL:EXG81415.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
NUDIX hydrolase
SCNpilot_cont_500_bf_scaffold_1565_4
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1696..2472)
DNA (777bp) protein (259aa)
N5,N10-methylene tetrahydromethanopterin reductase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE651 rbh
Putative F420-dependent oxidoreductase, MSMEG_2906 family {ECO:0000313|EMBL:EIF00037.1}; TaxID=928724 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
F420-dependent oxidoreductase rbh
SCNpilot_cont_500_bf_scaffold_1565_5
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2519..3154)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037DF66C
Conserved putative secreted protein {ECO:0000313|EMBL:AIG73850.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1565_6
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3295..3972
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MET4_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:CCW14142.1}; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1565_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4017..5222
DNA (1206bp) protein (402aa)
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:AEA25335.1}; EC=1.3.99.10 {ECO:0000313|EMBL:AEA25335.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
acyl-CoA dehydrogenase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE653 rbh
isovaleryl-CoA dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_1565_8
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5243..7390)
DNA (2148bp) protein (716aa)
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEAC1 rbh
PAS/PAC sensor(s)-containing diguanylate cyclase/phosphodiesterase rbh
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ACU40667.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
SCNpilot_cont_500_bf_scaffold_1565_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7494..7889)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDEF8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25338.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1565_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8117..10654)
DNA (2538bp) protein (846aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUE9_PSEUX rbh
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:AEA25339.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
DEAD/DEAH box helicase domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_1565_11
Kocuria polaris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10739..11290
DNA (552bp) protein (184aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J5E4_FRASU
Deaminase {ECO:0000313|EMBL:KHD99061.1}; TaxID=136273 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria polaris.;"
bifunctional deaminase-reductase domain-containing protein
SCNpilot_cont_500_bf_scaffold_1565_12
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11277..12176
DNA (900bp) protein (300aa)
Helix-turn-helix, AraC domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SFY1_GEOOG rbh
AraC family transcriptional regulator rbh
Helix-turn-helix, AraC domain protein {ECO:0000313|EMBL:ADB74886.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_500_bf_scaffold_1565_13
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12236..13723
DNA (1488bp) protein (496aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000363B90A
histidine kinase rbh
DNA ligase D/DNA polymerase LigD {ECO:0000313|EMBL:EHR53049.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
SCNpilot_cont_500_bf_scaffold_1565_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13896..14642
DNA (747bp) protein (249aa)
Beta-phosphoglucomutase family hydrolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUF1_PSEUX rbh
beta-phosphoglucomutase hydrolase rbh
Beta-phosphoglucomutase family hydrolase {ECO:0000313|EMBL:AEA25341.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1565_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14639..16999
DNA (2361bp) protein (787aa)
Kojibiose phosphorylase {ECO:0000313|EMBL:AEA25342.1}; EC=2.4.1.230 {ECO:0000313|EMBL:AEA25342.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Kojibiose phosphorylase; K10231 kojibiose phosphorylase [EC:2.4.1.230] rbh
Kojibiose phosphorylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUF2_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_1565_16
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17040..17393
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037EDB16
Sporulation protein, yteA family {ECO:0000313|EMBL:ERI10545.1}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus aneurinilyticus ATCC 12856.;"
yteA; hypothetical protein
SCNpilot_cont_500_bf_scaffold_1565_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17496..19835
DNA (2340bp) protein (780aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
UvrD/REP helicase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUF4_PSEUX rbh
UvrD/REP helicase rbh
SCNpilot_cont_500_bf_scaffold_1565_18
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19879..20322
DNA (444bp) protein (148aa)
membrane protein n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI00035C2E9F
Membrane protein {ECO:0000313|EMBL:AKG45435.1}; TaxID=408015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;"
integral membrane protein
SCNpilot_cont_500_bf_scaffold_1565_19
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20380..21147)
DNA (768bp) protein (256aa)
Short-chain dehydrogenase n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2QHW6_9PSEU rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KFZ80496.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
short-chain dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_1565_20
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21325..22020)
DNA (696bp) protein (232aa)
Putative glutamine amidotransferase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X5I0_9PSEU
Putative glutamine amidotransferase {ECO:0000313|EMBL:EHR50052.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
peptidase C26; K07010 putative glutamine amidotransferase
SCNpilot_cont_500_bf_scaffold_1565_21
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22017..22847)
DNA (831bp) protein (277aa)
Glutamine synthetase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X5H9_9PSEU
Glutamine synthetase {ECO:0000313|EMBL:EHR50051.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
glnA; glutamine synthetase
SCNpilot_cont_500_bf_scaffold_1565_22
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22793..23380)
DNA (588bp) protein (196aa)
Glutamine synthetase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X5H9_9PSEU
Glutamine synthetase {ECO:0000313|EMBL:EHR50051.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
glnA4-1; glutamine synthetase-like protein
SCNpilot_cont_500_bf_scaffold_1565_23
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23377..23757)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00036ECA90
putative choline kinase involved in LPS biosynthesis
Putative choline kinase involved in LPS biosynthesis {ECO:0000313|EMBL:AEV76162.1}; TaxID=710685 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
SCNpilot_cont_500_bf_scaffold_1565_24
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24130..26712
DNA (2583bp) protein (861aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI0003694B9A rbh
FAD-dependent oxidoreductase/aminomethyl transferase {ECO:0000313|EMBL:EWM12419.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
glycine cleavage system protein T rbh
SCNpilot_cont_500_bf_scaffold_1565_25
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26816..28666)
DNA (1851bp) protein (617aa)
ATP-dependent DNA helicase; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] rbh
ATP-dependent DNA helicase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B7A4_STRRD rbh
ATP-dependent DNA helicase {ECO:0000313|EMBL:ACZ89629.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_500_bf_scaffold_1565_26
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28663..29925)
DNA (1263bp) protein (421aa)
Transporter, major facilitator family protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1L7K1_9ACTO rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:EKX69021.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
Major facilitator superfamily MFS_1 rbh
SCNpilot_cont_500_bf_scaffold_1565_27
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29950..30963
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI000376FCE2
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EKX69016.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
ArsR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1565_28
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30965..31687)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q0C6_KRIFD rbh
hypothetical protein; K09166 hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB31918.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_500_bf_scaffold_1565_29
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31732..33564)
DNA (1833bp) protein (611aa)
ABC-type transporter n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JSP4_SACES rbh
ABC-type transporter rbh
ABC-type transporter {ECO:0000313|EMBL:CCH27874.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
SCNpilot_cont_500_bf_scaffold_1565_30
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33561..35366)
DNA (1806bp) protein (602aa)
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI00035E589C rbh
ABC transporter {ECO:0000313|EMBL:EWM14286.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial rbh
Displaying items 1-30 of 48 in total

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