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SCNpilot_cont_500_bf_scaffold_1924_11

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(8250..8462)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037F8116 similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 69.0
  • Bit_score: 108
  • Evalue 4.00e-21
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 69.0
  • Bit_score: 102
  • Evalue 4.10e-20
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABD11768.1}; TaxID=106370 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 69.0
  • Bit_score: 102
  • Evalue 1.80e-19

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Taxonomy

Frankia sp. CcI3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 213
GTGTGGCAGGCCCGGGAGTTCGACTACGACGCGGAGCTGGTGGACCTGATGCTGCCCGCGATTGACGGGGTGCAGGTGTGCCGTGAGCTGCGCAGCGCCGGCCGCCGGCCGCCGGTCCTGATGCTCACCGTGCGGGACGCGATCGAGGACCGCGTGCGGGGCCTGGACGCCGGCGCCGACGACTACCTGGCCAAGCCGTTCAGCTTTCGCTGA
PROTEIN sequence
Length: 71
VWQAREFDYDAELVDLMLPAIDGVQVCRELRSAGRRPPVLMLTVRDAIEDRVRGLDAGADDYLAKPFSFR*