ggKbase home page

SCNpilot_cont_500_bf_scaffold_2951_8

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(8690..10072)

Top 3 Functional Annotations

Value Algorithm Source
Choline dehydrogenase {ECO:0000313|EMBL:AEA22505.1}; EC=1.1.99.1 {ECO:0000313|EMBL:AEA22505.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 472.0
  • Bit_score: 528
  • Evalue 1.10e-146
Choline dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM18_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 472.0
  • Bit_score: 528
  • Evalue 8.10e-147
  • rbh
choline dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 472.0
  • Bit_score: 528
  • Evalue 2.50e-147
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1383
ATGGTCGACGTGCTGATCGTGGGCGGTGGCTCCGCGGGCTGCACGCTCGCGGGCCGGCTCACCGACCGGCCGGGTCGCAGCGTGCTGCTCCTGGAGGCCGGGCCGCTCGACTCCCTCCCCGAGCTCCGGGACGCCACCTCGCTCGCCGCCACCGCCCCGCGGCACCCCCGGAACTGGGCCTACGCCGCGGAGCTGCGGCCCGGCAACTCCCACATCGTGCCGCGCGGCAAGGGGCTCGGCGGGTCGGGCGCGATCAACGGCGCCAACTGGACGCGCGTCACCCCCGCCGACGCCGACGGCTGGGGCGTGCCGGGCTGGTCCTACGCCGACCTGCTGCCGCACTACGTCCGCGCCGAGCACGACCACGACTTCGCCGGTCCGCACCACGGCGACCACGGCCCGGTCCCGGTCGTCCGCCCGGCCGGTGACCTGCGCCATCCCGCCGTCGACCGGTTCCTCGAGGCCGCGGCGAAGCTGGGTTTCCCCGACGAGGCGGACAAGAACGCCGGTGGTGCGCCCGGCGCGGGGCTCGTCCCGTCGAACTCGCTGAACGGGGTGCGGGTCGACGCCGCGTCGGCGTACCTGGTGGGCGAGCGGCCCGGCCTGACCGTCCGCGGGCTCGCCCCCGTCGCGCGCGTCCTGCTCGACCACGGCCGGGCCTGCGGGGTGGTGCTGCGCAGCGGCGAGATCATCGAGGCGGGTGAGGTGGTGCTGTGCGCGGGCGCGGTGGCCACGCCGCAGGTGCTGATGGCGTCCGGGATCGGGGACGGGGTGGGCCAGGGCTGGTCCGACCACCCGTCGGTCTACCTCCCGTTCGCCGACGTCGACCCCGGCGCGCACCCGCAGGCGCCCGGCAGCCAGGTGGCGCTCGACCTCGACTGCGGTGCCGATCCCGCCGGCGACGCGGAGGTGCTGCTGTTCGTCCGGCCCTTCGTGCCGGGGGGTGACCTGCACCTGATGTGCGCGCTGCAGGCCCCCGACAGCCGCGGCACCATCGAGCTCGGCGACCCCCGGCCCCGGATCGCCTACGGCTACCTGCGCACCGAGCACGACCGGCGCCGGCTGCGGCACGCCATCCGCACCGCCGCCGAGTTGCTGCGGGCGGGACTGGGCCGGCGCACCGCCCCCGAGGGTGACGTCCTGGGCAACGACCGTGCGCTCGACGGCTGGATCGCCGAGAACCTCACCACGTCCGTCCACATGTGCGGGAGCGCCGCGATCGGCCGGGTCGTCGACGCGGAGCTACGGGTGATCGGGGTGGACGGGTTGCGCGTCGCCGACACGTCCGTGATCCCGACGGTGCCGCGGCGCGGGCCGGCGGCCACGGCCGTCGCGATCGGGGAGAAGGCGGCGGACCTGCTCACCGTCGAGGAACCGGCGTAG
PROTEIN sequence
Length: 461
MVDVLIVGGGSAGCTLAGRLTDRPGRSVLLLEAGPLDSLPELRDATSLAATAPRHPRNWAYAAELRPGNSHIVPRGKGLGGSGAINGANWTRVTPADADGWGVPGWSYADLLPHYVRAEHDHDFAGPHHGDHGPVPVVRPAGDLRHPAVDRFLEAAAKLGFPDEADKNAGGAPGAGLVPSNSLNGVRVDAASAYLVGERPGLTVRGLAPVARVLLDHGRACGVVLRSGEIIEAGEVVLCAGAVATPQVLMASGIGDGVGQGWSDHPSVYLPFADVDPGAHPQAPGSQVALDLDCGADPAGDAEVLLFVRPFVPGGDLHLMCALQAPDSRGTIELGDPRPRIAYGYLRTEHDRRRLRHAIRTAAELLRAGLGRRTAPEGDVLGNDRALDGWIAENLTTSVHMCGSAAIGRVVDAELRVIGVDGLRVADTSVIPTVPRRGPAATAVAIGEKAADLLTVEEPA*