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SCNpilot_cont_500_bf_scaffold_2951

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2951_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17..1963
DNA (1947bp) protein (649aa)
Copper amine oxidase domain-containing protein; K00276 primary-amine oxidase [EC:1.4.3.21] rbh
Copper amine oxidase domain-containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJQ9_PSEUX rbh
Copper amine oxidase domain-containing protein {ECO:0000313|EMBL:AEA25919.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2951_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1960..2871)
DNA (912bp) protein (304aa)
F420-dependent oxidoreductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY98_PSEUX rbh
F420-dependent oxidoreductase rbh
F420-dependent oxidoreductase {ECO:0000313|EMBL:AEA24720.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2951_3
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2935..3762
DNA (828bp) protein (276aa)
peptidase n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000379BA8F rbh
Putative stomatin/prohibitin-family membrane protease {ECO:0000313|EMBL:EMD27458.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2951_4
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4023..4571)
DNA (549bp) protein (183aa)
Putative transcriptional regulator, XRE family n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B132_STRRD
XRE family transcriptional regulator
Putative transcriptional regulator, XRE family {ECO:0000313|EMBL:ACZ83439.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_500_bf_scaffold_2951_5
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4591..5766
DNA (1176bp) protein (392aa)
Putative benzoate transporter protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B133_STRRD rbh
benzoate transporter protein; K05782 benzoate membrane transport protein rbh
Putative benzoate transporter protein {ECO:0000313|EMBL:ACZ83440.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_500_bf_scaffold_2951_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6295..8313)
DNA (2019bp) protein (673aa)
peptidyl-dipeptidase Dcp; K01284 peptidyl-dipeptidase Dcp [EC:3.4.15.5] rbh
Peptidyl-dipeptidase Dcp {ECO:0000313|EMBL:AEA22506.1}; EC=3.4.15.5 {ECO:0000313|EMBL:AEA22506.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
peptidase M3 n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE0E8 rbh
SCNpilot_cont_500_bf_scaffold_2951_7
Vibrio neptunius, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8336..8830
DNA (495bp) protein (165aa)
MutT/NUDIX family protein n=2 Tax=Vibrio tubiashii RepID=F9TCU2_9VIBR
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KJY91476.1}; TaxID=170651 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio neptunius.;"
NUDIX hydrolase
SCNpilot_cont_500_bf_scaffold_2951_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8690..10072)
DNA (1383bp) protein (461aa)
Choline dehydrogenase {ECO:0000313|EMBL:AEA22505.1}; EC=1.1.99.1 {ECO:0000313|EMBL:AEA22505.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Choline dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM18_PSEUX rbh
choline dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_2951_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10092..11321
DNA (1230bp) protein (410aa)
aspartyl aminopeptidase; K01267 aspartyl aminopeptidase [EC:3.4.11.21] rbh
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
M18 family aminopeptidase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM17_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_2951_10
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11305..12111)
DNA (807bp) protein (269aa)
Acetyltransferase/esterase n=1 Tax=Actinomadura madurae RepID=B0BLM8_9ACTO
Alpha/beta hydrolase {ECO:0000313|EMBL:EWM19547.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
abhydrolase, alpha/beta hydrolase fold protein
SCNpilot_cont_500_bf_scaffold_2951_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12216..13508
DNA (1293bp) protein (431aa)
General substrate transporter n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMT4_PSEUX rbh
general substrate transporter rbh
General substrate transporter {ECO:0000313|EMBL:AEA25033.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2951_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13505..14347
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT60_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA26278.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2951_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14832..15449
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM15_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22502.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_2951_14
unknown

Not on your lists

15558..15950
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2951_15
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15770..16396)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00037063DF
Predicted protein {ECO:0000313|EMBL:EFL10328.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2951_16
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16409..17299)
DNA (891bp) protein (297aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Streptomyces sp. SirexAA-E RepID=G2NA66_9ACTO rbh
3-beta hydroxysteroid dehydrogenase {ECO:0000313|EMBL:KJK57079.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
NAD-dependent epimerase/dehydratase rbh
SCNpilot_cont_500_bf_scaffold_2951_17
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17387..17968
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000365790B
regulatory protein TetR
Regulatory protein TetR {ECO:0000313|EMBL:ADI10338.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
SCNpilot_cont_500_bf_scaffold_2951_18
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18476..19105
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE0C8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA72357.1}; TaxID=1112204 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans (strain DSM 44266 / VH2).;"
SCNpilot_cont_500_bf_scaffold_2951_19
unknown

Not on your lists

19330..20100
DNA (771bp) protein (257aa)

This feature has no annotations

Displaying 19 items

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