ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_cont_500_bf_scaffold_4163_9

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 7648..9405

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT7_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 420.0
  • Bit_score: 649
  • Evalue 2.30e-183
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 420.0
  • Bit_score: 649
  • Evalue 7.30e-184
Uncharacterized protein {ECO:0000313|EMBL:AEA27662.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 420.0
  • Bit_score: 649
  • Evalue 3.30e-183

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1758
ATGAGCACAGACCACATCACCGACCCGGCGCCGCCGCCGGCCGGCACCACGGGGTGGATTGAGCAGGACCAGCTCACCCGCGCCCAAAAGGCCCTCCTCGCGCTCACCGGGGACGTCGCTCGCCAGCTCGCCGAGGAGCACGGCGTGTGCGTGCGCCCACTCGCGCTGCGCAGGATTGACCTCACCTCGGGGAAGGTCGACGTGGTCCCCGTCCCCTGCGGTGCCCGGCGGGAGGACCTGTGCAAGCCGTGTGCGGAGAAGAACCGGCGGTTGCGGATGGTGCAGTGCCGCGAAGGCTGGCACCTCGAGCACGAACCCATCGCCCGCCCGGCCGATCCCAGTTCCGCTCAGAAGGAGCTGATGGCTACGCGGGCGGACCTGCATGCCGCCTACCAGCTCGCCCGCCTGGCCGGCGACGAGGACGAGTGCGACCAGATCCGCGACGCGGTCGAGGTGGTGGACGGGCAGCTGCGCGGGCTCGGGGTGCGGGGCCGGCTCGAACCCCTCGACCCACCCGACCGGCCCGCCCGCAAACGCTCGACCCGCCGGCGGCAGGACGCGCCCAACCTGCCCCGCCGGCCGGTGGAGAAACGGACTCTCGGGCGGGTGTTCGGGGAGAAGTATCGGCCCTCGACCTTCCTGACGCTGACGCTCGACTCGTACGGGCGGGTGGACGGGGACGGGGCCGCGCTCGACCCGGACCGCTACGACTACCGCCGCGCCGCGCGGGACGCGATCCACTTCCCGGCCGTGCTCGACCGGTTCTGGCAGAACACCCGGCGTTGTGTCGGGTGGGAGGTGCAGTATTTCGGCACGATCGAGCCGCAACGCCGGGGTGCCCCGCACTTCCACGCCGCCATCCGAGGTTCGATCCCGCGCGCCGAGCTGCGCGCGATCGCGGCCGCGACCTATCACCAGGTGTGGTGGCCGGCGCACGACGAGATCCGCTACAGCGGGGACCGGGTGCCGCGCTGGGACGACCGCAGCAAGGGGTTCGTCGATCCCGATACCCGCACACCGTTGCCGACCTGGCAGGAGGCGACCGACCCGGCGAACCTGCCGGCGCCGGCGCACACGGTGCGGTTCGGGGCGCAGGTCCACGTGAAGGGCATCCTCGGGGGCACCGAGGAGGCCGGGCGGCACATCGGCTACCTCACCAAGTACCTGACCAAGGACGTCGCGCACGCCGCCGGCCTCGCCGCGAGCTGCGGATCACGCCGTGCTCGCCGCGCTGCGGGGTGTGGCTGCTCTACGGCGTCCAACCCCAAGGCGCCCGCCTGGCCACCGTGCCGGGGGTGTGCAAGGGCAAGGCGCACATGCCTGAACACCTCGGTATCGCCGGCCGCCGCGTCCTGGTCTCGCGCAAGTGGTCGGGCAAGACCCTGGATGACCACCGGGCCGAGCGCGCGGCGTTCGTTCGGCAACTGCTCGACAAGGCTGGCGTGCGACCCGGCTACGCCGTGGATGACGGACCGTTCGAGTGGGAGAAGACCAAGCCCGGCGACCCCGACGTCCCTACCCGGCCCGCGCTGCTCCTGGCCGCCATCTCGGAGCGACAACGCTGGAAAGCCGACTACGACGCCGCGCAACTCGCGGCCGGCGACGACCCACCCGAGAACCGTTCGGCAACTACCGAGGAGGCAGCGTGATGGAGACCGGAACCGCACGGCCGTTACGAATCGTGCTCACGGTGGAGGAGGCGGCGGAACGCCTCGGAATTGGCCGGACGCTGATGTACGCACTGGTCACGGCCGGTGA
PROTEIN sequence
Length: 586
MSTDHITDPAPPPAGTTGWIEQDQLTRAQKALLALTGDVARQLAEEHGVCVRPLALRRIDLTSGKVDVVPVPCGARREDLCKPCAEKNRRLRMVQCREGWHLEHEPIARPADPSSAQKELMATRADLHAAYQLARLAGDEDECDQIRDAVEVVDGQLRGLGVRGRLEPLDPPDRPARKRSTRRRQDAPNLPRRPVEKRTLGRVFGEKYRPSTFLTLTLDSYGRVDGDGAALDPDRYDYRRAARDAIHFPAVLDRFWQNTRRCVGWEVQYFGTIEPQRRGAPHFHAAIRGSIPRAELRAIAAATYHQVWWPAHDEIRYSGDRVPRWDDRSKGFVDPDTRTPLPTWQEATDPANLPAPAHTVRFGAQVHVKGILGGTEEAGRHIGYLTKYLTKDVAHAAGLAASCGSRRARRAAGCGCSTASNPKAPAWPPCRGCARARRTCLNTSVSPAAASWSRASGRARPWMTTGPSARRSFGNCSTRLACDPATPWMTDRSSGRRPSPATPTSLPGPRCSWPPSRSDNAGKPTTTPRNSRPATTHPRTVRQLPRRQRDGDRNRTAVTNRAHGGGGGGTPRNWPDADVRTGHGR*