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SCNpilot_cont_500_bf_scaffold_4163

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4163_1

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1119..1619
DNA (501bp) protein (167aa)
Protein containing GCN5-related N-acetyltransferase domain n=1 Tax=sediment metagenome RepID=D9PL15_9ZZZZ
Protein containing GCN5-related N-acetyltransferase domain {ECO:0000313|EMBL:EFK95750.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
SCNpilot_cont_500_bf_scaffold_4163_2
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1990..2571)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEDE2
Uncharacterized protein {ECO:0000313|EMBL:AHH94657.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4163_3
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3055..3573)
DNA (519bp) protein (173aa)
Acetyltransferase n=1 Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V5U9_9PSEU
Acetyltransferase {ECO:0000313|EMBL:EID55502.1}; TaxID=882086 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora xinjiangensis XJ-54.;"
acetyltransferase
SCNpilot_cont_500_bf_scaffold_4163_4
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3570..4355)
DNA (786bp) protein (262aa)
Transcriptional regulator n=1 Tax=Saccharomonospora azurea SZMC 14600 RepID=H0K6G4_9PSEU
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AHH17606.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_4163_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4481..4912
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT2_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27657.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_4163_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5020..5421
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT3_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27658.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_4163_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5418..5738
DNA (321bp) protein (107aa)
Transcriptional regulator WhiB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT4_PSEUX
transcription factor WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_4163_8
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6065..7651
DNA (1587bp) protein (529aa)
cell division protein FtsK n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262761F
DNA segregation ATPase FtsK/SpoIIIE {ECO:0000313|EMBL:AIJ26857.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
ftsK; DNA segregation ATPase FtsK/SpoIIIE
SCNpilot_cont_500_bf_scaffold_4163_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7648..9405
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27662.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_4163_10
unknown

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9380..9511
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4163_11
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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9511..10734
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Salinispora arenicola RepID=UPI000361273B rbh
integrase family protein rbh
Integrase family protein {ECO:0000313|EMBL:AGL21466.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
SCNpilot_cont_500_bf_scaffold_4163_12
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10851..11204)
DNA (354bp) protein (118aa)
endonuclease n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036A8F7A
Endonuclease {ECO:0000313|EMBL:KDN23912.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
endonuclease/exonuclease/phosphatase family protein
SCNpilot_cont_500_bf_scaffold_4163_13
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11751..12173)
DNA (423bp) protein (141aa)
NUDIX hydrolase n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L5X4_FRASN
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ABW14931.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
SCNpilot_cont_500_bf_scaffold_4163_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12183..12665)
DNA (483bp) protein (161aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS48_PSEUX
CMP/dCMP deaminase zinc-binding protein
SCNpilot_cont_500_bf_scaffold_4163_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12662..13180)
DNA (519bp) protein (173aa)
tRNA adenosine deaminase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF14D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22607.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_4163_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13273..14478
DNA (1206bp) protein (402aa)
amidohydrolase; K01451 hippurate hydrolase [EC:3.5.1.32] rbh
Amidohydrolase {ECO:0000313|EMBL:AEA22606.1}; EC=3.5.1.47 {ECO:0000313|EMBL:AEA22606.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Amidohydrolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS46_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_4163_17
unknown

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comp(14565..14669)
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 17 items

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