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SCNpilot_cont_500_bf_scaffold_5668_8

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(2965..3408)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH5_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 148.0
  • Bit_score: 177
  • Evalue 8.60e-42
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 148.0
  • Bit_score: 177
  • Evalue 2.70e-42
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AEA26549.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 148.0
  • Bit_score: 177
  • Evalue 1.20e-41

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 444
GTGGCACCTCGCGGCACTTATCGCCAAATCGCGGACGATCTACGTGTGCGCATCAGCAGTGGCAGCCTGGCGGCCGGCGCGATGGTGCCCTCTGAGCTAACGATTGCGGAGGAGCGGTCTGTATCCCGTGGCACGGTTCGTTCGGCGCTCGCACTGCTCGTTGACGAGGGGTTGATCGAGGTCGTCCCGGGGCAAGGACGGCGGGTGGTGGGTAAGGCCGGCCCCGGCGCACCGACCACTGCATGGGAACGGGTCGCAGAAGTTCTCCGGCAACGGCTGGCATCGGGGGAGGTCTCACCGTCCACGCCCCTCCCGAGCGAAGCCGACCTCGTCGCCGAGTTCGACGTCTCCCGTAACACCGTCCGACGCGCCTACCGCCAGCTCGTCGACGATGGCCTCGTCGTCATCCGCCACGGCGCCGGTGCGTTCCCCGCACCACGCTGA
PROTEIN sequence
Length: 148
VAPRGTYRQIADDLRVRISSGSLAAGAMVPSELTIAEERSVSRGTVRSALALLVDEGLIEVVPGQGRRVVGKAGPGAPTTAWERVAEVLRQRLASGEVSPSTPLPSEADLVAEFDVSRNTVRRAYRQLVDDGLVVIRHGAGAFPAPR*