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SCNpilot_cont_500_bf_scaffold_5668

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5668_1
unknown

Not on your lists

comp(1..132)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5668_2
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(133..654)
DNA (522bp) protein (174aa)
Transcriptional regulator WhiB n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PBM7_9ACTO
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
transcription factor WhiB
SCNpilot_cont_500_bf_scaffold_5668_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(651..869)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26545.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_5668_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(873..1370)
DNA (498bp) protein (166aa)
DNA binding domain protein, excisionase family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH2_PSEUX
excisionase
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:AEA26546.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_5668_5
unknown

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comp(1430..1999)
DNA (570bp) protein (190aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5668_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2079..2357
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH3_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26547.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_5668_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2347..2922)
DNA (576bp) protein (192aa)
NUDIX hydrolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH4_PSEUX
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEA26548.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_5668_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2965..3408)
DNA (444bp) protein (148aa)
Transcriptional regulator, GntR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH5_PSEUX
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AEA26549.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_5668_9
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(3603..5945)
DNA (2343bp) protein (781aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8BJX3_RHIRD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
SCNpilot_cont_500_bf_scaffold_5668_10
Streptomyces pluripotens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5970..6845)
DNA (876bp) protein (292aa)
regulatory protein n=1 Tax=Streptomyces acidiscabies RepID=UPI000287C85D
Regulatory protein {ECO:0000313|EMBL:KIE38998.1}; TaxID=1355015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pluripotens.;"
regulatory protein
SCNpilot_cont_500_bf_scaffold_5668_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7042..8721)
DNA (1680bp) protein (560aa)
Integrase family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLQ9_PSEUX rbh
integrase protein rbh
Integrase family protein {ECO:0000313|EMBL:AEA28191.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Displaying 11 items

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