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SCNpilot_cont_500_bf_scaffold_6152_3

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 1708..2010

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA-binding protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5WWC5_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 100.0
  • Bit_score: 83
  • Evalue 1.50e-13
Putative RNA-binding protein {ECO:0000313|EMBL:EHR49407.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 100.0
  • Bit_score: 83
  • Evalue 2.10e-13
GAF domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 96.0
  • Bit_score: 68
  • Evalue 1.60e-09

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Taxonomy

Saccharomonospora marina → Saccharomonospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 303
TTGACGTTCGCGTTCCCGTTGCAGATCGGGGCGATCGCGGTCGGGAGCCTGGACCTGTACCGGGTGACGCCCGGGCTGCTCACCGCGGCGGAGTTGAGCGCGGCGTTGCTGGTCGCCGACGCCGCGCTGTGGGCGCTGCTGGACCTGCGCACCCCGCGACCCGACACCGGGCCCGACCACACCGGCGACACGGGCGACCACCGGGACGGGGCCGGGGCCGGGGGCGGGGAGGGGTGGCTGCGGGTGCTGCATCGCGATCATGCCGTGGTCTACCAGGCCACCGGGGTGGTCCTCGGGTCGTGA
PROTEIN sequence
Length: 101
LTFAFPLQIGAIAVGSLDLYRVTPGLLTAAELSAALLVADAALWALLDLRTPRPDTGPDHTGDTGDHRDGAGAGGGEGWLRVLHRDHAVVYQATGVVLGS*