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SCNpilot_cont_500_bf_scaffold_4454

Search features with annotation key words

Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4454_1
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..371
DNA (369bp) protein (123aa)
ribulose bisphosphate carboxylase, small chain (EC:4.1.1.39); K01602 ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
Ribulose 1,5-bisphosphate carboxylase small subunit {ECO:0000313|EMBL:ABA06178.1}; EC=4.1.1.39 {ECO:0000313|EMBL:ABA06178.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Ribulose 1,5-bisphosphate carboxylase small subunit n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SNG3_NITWN
SCNpilot_cont_500_bf_scaffold_4454_2
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

530..1444
DNA (915bp) protein (305aa)
CbbX like protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SNG4_NITWN rbh
CbbX like protein rbh
CbbX like protein {ECO:0000313|EMBL:ABA06177.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_4454_3
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1723..2226
DNA (504bp) protein (168aa)
UPI0003CE06F3 related cluster n=1 Tax=unknown RepID=UPI0003CE06F3
Uncharacterized protein {ECO:0000313|EMBL:ESY72705.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4454_4
Pseudogymnoascus pannorum, Pseudogymnoascus, Leotiomycetes, Ascomycota, Fungi

Not on your lists

3102..3929
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) RepID=A7EJN8_SCLS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFY03084.1}; TaxID=1391699 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Leotiomycetes incertae sedis; Pseudeurotiaceae; Pseudogymnoascus.;" source="Pseudogymnoascus pannorum VKM F-3808.;"
SCNpilot_cont_500_bf_scaffold_4454_5
unknown

Not on your lists

3910..4269
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4454_6
unknown

Not on your lists

4428..5165
DNA (738bp) protein (246aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4454_7
unknown

Not on your lists

5192..5602
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4454_8
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5667..6080
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I307_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJN13453.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4454_9
unknown

Not on your lists

6113..6745
DNA (633bp) protein (211aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4454_10
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6791..7831)
DNA (1041bp) protein (347aa)
LuxR family transcriptional regulator n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00037491A9
Uncharacterized protein {ECO:0000313|EMBL:KGM34319.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
LuxR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_4454_11
unknown

Not on your lists

comp(8003..8305)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4454_12
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8642..9331)
DNA (690bp) protein (230aa)
SH3 type 3 domain protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S418_9RHOB
SH3 type 3 domain protein {ECO:0000313|EMBL:EEW24280.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
Gifsy-1 prophage protein
SCNpilot_cont_500_bf_scaffold_4454_13
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9383..10072)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMZ9_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS69392.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_4454_trna_1
unknown

Not on your lists

comp(10656..10729)
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_4454_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11114..11428)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGE3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64704.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4454_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11778..12122
DNA (345bp) protein (115aa)
30S ribosomal protein S20 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RS20_NITHX
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20
30S ribosomal protein S20 {ECO:0000255|HAMAP-Rule:MF_00500}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4454_16
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13284..14453
DNA (1170bp) protein (390aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=DNAA_NITWN
dnaA; chromosome replication initiator DnaA; K02313 chromosomal replication initiator protein
Chromosomal replication initiator protein DnaA {ECO:0000255|HAMAP-Rule:MF_00377}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_4454_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14432..14605
DNA (174bp) protein (58aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSP4_9BRAD
dnaA; chromosomal replication initiation protein; K02313 chromosomal replication initiator protein
Chromosomal replication initiator protein DnaA {ECO:0000255|HAMAP-Rule:MF_00377}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4454_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14841..15872
DNA (1032bp) protein (344aa)
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
DNA polymerase III subunit beta n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS93_NITHX
SCNpilot_cont_500_bf_scaffold_4454_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16038..17192
DNA (1155bp) protein (385aa)
DNA replication and repair protein RecF n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS92_NITHX rbh
recF; recombination protein F; K03629 DNA replication and repair protein RecF rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4454_20
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17321..19471
DNA (2151bp) protein (717aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000377426F rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC55017.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_4454_21
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19904..22345
DNA (2442bp) protein (814aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
gyrB; DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSP3_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_4454_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22373..23131)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS90_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE60907.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4454_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23686..24285
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS89_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE60908.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4454_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24541..24825)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS87_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE60910.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4454_25
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24991..25227
DNA (237bp) protein (79aa)
Pirin n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WT25_9BRAD
Pirin {ECO:0000313|EMBL:EAQ37189.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
pirin; K06911
SCNpilot_cont_500_bf_scaffold_4454_26
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25224..25826
DNA (603bp) protein (201aa)
Pirin-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS86_NITHX
Pirin-like protein; K06911
Pirin-like protein {ECO:0000313|EMBL:ABE60911.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4454_27
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25914..26531)
DNA (618bp) protein (206aa)
PfkB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS85_NITHX
PfkB protein
PfkB {ECO:0000313|EMBL:ABE60912.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4454_28
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27108..28667
DNA (1560bp) protein (520aa)
Integral membrane protein MviN n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS84_NITHX rbh
integral membrane protein MviN; K03980 virulence factor rbh
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4454_29
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28760..29776
DNA (1017bp) protein (339aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2]
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Tryptophan--tRNA ligase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS83_NITHX
Displaying items 1-30 of 37 in total

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